Job Description P21889 Confidence 98.38% Date Thu Jan 5 11:38:40 GMT 2012 Rank 82 Aligned Residues 121 % Identity 12% Template c2dq0A_ PDB info PDB header:ligase Chain: A: PDB Molecule:seryl-trna synthetase; PDBTitle: crystal structure of seryl-trna synthetase from pyrococcus2 horikoshii complexed with a seryl-adenylate analog Resolution 2.60 Å

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		136	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.					.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.							.	.
Predicted Secondary structure																																			.	.	.	.																																				.	.	.	.	.	.
Query SS confidence																																			.	.	.	.																																				.	.	.	.	.	.
Query Sequence		Q	R	L	K	T	R	A	K	I	T	S	L	V	R	R	F	M	D	D	H	G	F	L	D	I	E	T	P	M	L	T	K	A	.	.	.	.	T	P	E	G	A	R	D	Y	L	V	P	S	R	V	H	K	G	K	F	Y	A	L	P	Q	S	P	Q	L	F	K	Q	L	L	M	M	.	.	.	.	.	.	S	G
Query Conservation																																			.	.	.	.																																				.	.	.	.	.	.
Alig confidence																																			.	.	.	.																																				.	.	.	.	.	.
Template Conservation
Template Sequence		E	I	V	I	L	D	L	A	L	I	R	F	A	L	D	R	L	I	E	K	G	F	T	P	V	I	P	P	Y	M	V	R	R	F	V	E	E	G	S	T	S	F	E	D	F	E	D	V	I	Y	K	V	E	D	E	D	L	Y	L	I	P	T	A	E	H	P	L	A	G	M	H	A	N	E	I	L	D	G	K	D
Template Known Secondary structure																					T	T								S									T	T	S		T	T					T			B		T	T	S	S					S	S	T							T	T	T	T					T	T	T
Template Predicted Secondary structure
Template SS confidence
		191	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270
		206	.		.	.	210	.	.	.	.	.	.	.	.	.	220	.	.								.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.
Predicted Secondary structure				.																.	.	.	.	.	.	.
Query SS confidence				.																.	.	.	.	.	.	.
Query Sequence		F	D	.	R	Y	Y	Q	I	V	K	C	F	R	D	E	D	L	R	.	.	.	.	.	.	.	A	D	R	Q	P	E	F	T	Q	I	D	V	E	T	S	F	M	T	A	P	Q	V	R	E	V	M	E	A	L	V	R	H	L	W	L
Query Conservation				.																.	.	.	.	.	.	.
Alig confidence				.																.	.	.	.	.	.	.															.
Template Conservation																																									.
Template Sequence		L	P	L	L	Y	V	G	V	S	P	C	F	R	K	E	A	G	T	A	G	K	D	T	K	G	I	F	R	V	H	Q	F	H	K	V	E	Q	F	V	.	Y	S	R	P	E	E	S	W	E	W	H	E	K	I	I	R	N	A	E	E
Template Known Secondary structure			S														T	T		S	S		S			S	S	S	S		S										.				T	T	T
Template Predicted Secondary structure																																									.
Template SS confidence
		271	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.		310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions