Job Description P21889 Confidence 95.89% Date Thu Jan 5 11:38:40 GMT 2012 Rank 104 Aligned Residues 98 % Identity 17% Template c1ynxA_ PDB info PDB header:dna binding protein Chain: A: PDB Molecule:replication factor-a protein 1; PDBTitle: solution structure of dna binding domain a (dbd-a) of2 s.cerevisiae replication protein a (rpa) Resolution UNK

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.										.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.
Predicted Secondary structure																							.	.	.	.	.	.	.	.	.
Query SS confidence																							.	.	.	.	.	.	.	.	.
Query Sequence		E	Y	C	G	Q	L	R	L	S	H	V	G	Q	Q	V	T	L	C	G	W	V	.	.	.	.	.	.	.	.	.	N	R	R	R	D	L	G	S	L	I	F	I	D	M	R	D	R	E	G	I	V	Q	V	F	F	D	P	D	R	A	D	A	L	K	L	A	S	E	L	R	N	E	F	C	I	Q	V	T	G	T
Query Conservation																							.	.	.	.	.	.	.	.	.
Alig confidence										.	.												.	.	.	.	.	.	.	.	.																													.	.
Template Conservation										.	.																																																	.	.
Template Sequence		F	A	I	E	Q	L	S	P	.	.	Y	Q	N	V	W	T	I	K	A	R	V	S	Y	K	G	E	I	K	T	W	H	N	Q	R	G	D	G	K	L	F	N	V	N	F	L	D	T	S	G	E	I	R	A	T	A	F	N	D	.	.	F	A	T	K	F	N	E	I	L	Q	E	G	K	V	Y	Y	V	S	K	A
Template Known Secondary structure				G	G	G			T	.	.	T	T																					S	S													T	T											.	.									S		S	S	S						S
Template Predicted Secondary structure										.	.																																																	.	.
Template SS confidence
		185	.	.	.	.	190	.	.			.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240			.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260
		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	R	A	R	D	E	K	N	I	N	R	D	M	A	T	G	E	I	E	V	L	A	S	S	L	T	I	I	N	R	A	D	V
Query Conservation
Alig confidence																.	.
Template Conservation																.	.
Template Sequence		K	L	Q	P	A	K	P	Q	F	T	N	L	T	H	.	.	P	Y	E	L	N	L	D	R	D	T	V	I	E	E	C	F	D
Template Known Secondary structure								T	T	T	S	S	S	S	S	.	.								S	S						S
Template Predicted Secondary structure																.	.
Template SS confidence
		261	.	.	.	.	.	.	.	.	270	.	.	.	.			.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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