Job Description P21889 Confidence 98.83% Date Thu Jan 5 11:38:40 GMT 2012 Rank 70 Aligned Residues 120 % Identity 22% Template c1nj8C_ PDB info PDB header:ligase Chain: C: PDB Molecule:proline-trna synthetase; PDBTitle: crystal structure of prolyl-trna synthetase from2 methanocaldococcus janaschii Resolution 3.20 Å

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		138	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.									.	170	.	.		.	.	.	.	.	.	.	180	.	.	.	.				.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.
Predicted Secondary structure																																	.	.	.	.	.	.	.	.					.													.	.	.
Query SS confidence																																	.	.	.	.	.	.	.	.					.													.	.	.
Query Sequence		L	K	T	R	A	K	I	T	S	L	V	R	R	F	M	D	D	H	G	F	L	D	I	E	T	P	M	L	T	K	A	.	.	.	.	.	.	.	.	T	P	E	G	.	A	R	D	Y	L	V	P	S	R	V	H	K	.	.	.	G	K	F	Y	A	L	P	Q	S	P	Q	L	F	K	Q	L	L	M	M	S	G
Query Conservation																																	.	.	.	.	.	.	.	.					.													.	.	.
Alig confidence																																	.	.	.	.	.	.	.	.					.													.	.	.
Template Conservation
Template Sequence		F	K	I	R	R	Y	T	F	E	I	I	R	N	L	L	D	E	S	G	H	D	E	A	L	F	P	M	L	I	P	E	D	L	L	A	K	E	A	E	H	I	K	G	F	E	D	E	V	Y	W	V	T	H	G	G	K	T	Q	L	D	V	K	L	A	L	R	P	T	S	E	T	P	I	Y	Y	M	M	K	L	W
Template Known Secondary structure																			T	T								S												S	S	S	G	G	G	G	G	G							S	S	S	S										S	S	S										T	T
Template Predicted Secondary structure
Template SS confidence
		34	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.
		206								.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.				.	.	.	.	.	230	.	.		.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.
Predicted Secondary structure			.	.	.	.	.	.	.																			.	.	.									.
Query SS confidence			.	.	.	.	.	.	.																			.	.	.									.
Query Sequence		F	.	.	.	.	.	.	.	D	R	Y	Y	Q	I	V	K	C	F	R	D	E	D	L	R	A	D	.	.	.	R	Q	P	E	F	T	Q	I	.	D	V	E	T	S	F	M	T	A	P	Q	V	R	E	V	M	E	A	L	V	R	H	L	W	L
Query Conservation			.	.	.	.	.	.	.																			.	.	.									.
Alig confidence			.	.	.	.	.	.	.																			.	.	.									.
Template Conservation
Template Sequence		V	K	V	H	T	D	L	P	I	K	I	Y	Q	I	V	N	T	F	R	Y	E	T	K	H	T	R	P	L	I	R	L	R	E	I	M	T	F	K	E	A	H	T	A	H	S	T	K	E	E	A	E	N	Q	V	K	E	A	I	S	I	Y	K	K
Template Known Secondary structure				B	T	T	S																	S			B	T	T	T	B		S	S		S										S	S
Template Predicted Secondary structure
Template SS confidence
		114	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions