Job Description P21889 Confidence 98.56% Date Thu Jan 5 11:38:40 GMT 2012 Rank 76 Aligned Residues 117 % Identity 22% Template c1nj2A_ PDB info PDB header:ligase Chain: A: PDB Molecule:proline-trna synthetase; PDBTitle: crystal structure of prolyl-trna synthetase from methanothermobacter2 thermautotrophicus Resolution 3.11 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		138	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.				.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.
Predicted Secondary structure																																																				.	.	.																					.	.	.	.	.	.	.
Query SS confidence																																																				.	.	.																					.	.	.	.	.	.	.
Query Sequence		L	K	T	R	A	K	I	T	S	L	V	R	R	F	M	D	D	H	G	F	L	D	I	E	T	P	M	L	T	K	A	T	P	E	G	A	R	D	Y	L	V	P	S	R	V	H	K	G	K	F	.	.	.	Y	A	L	P	Q	S	P	Q	L	F	K	Q	L	L	M	M	S	G	F	D	.	.	.	.	.	.	.
Query Conservation																																																				.	.	.																					.	.	.	.	.	.	.
Alig confidence																	.																.	.																		.	.	.																					.	.	.	.	.	.	.
Template Conservation																	.																.	.
Template Sequence		F	M	I	R	K	N	T	L	K	I	L	R	R	I	L	.	D	R	D	H	E	E	V	L	F	P	L	L	V	P	E	.	.	D	E	L	A	E	V	Y	W	V	T	H	G	G	L	S	K	L	Q	R	K	L	A	L	R	P	T	S	E	T	V	M	Y	P	M	F	A	L	W	V	R	S	H	T	D	L	P	M
Template Known Secondary structure																	.	T	T	T								S					.	.												S	S	S	S										S		T														S	T	T	T
Template Predicted Secondary structure																	.																.	.
Template SS confidence
		51	.	.	.	.	.	.	.	.	60	.	.	.	.	.		.	.	.	.	70	.	.	.	.	.	.	.	.	.	80			.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.
		208	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.				.	.	.	.	.	230	.	.		.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.
Predicted Secondary structure																			.	.	.									.
Query SS confidence																			.	.	.									.
Query Sequence		R	Y	Y	Q	I	V	K	C	F	R	D	E	D	L	R	A	D	.	.	.	R	Q	P	E	F	T	Q	I	.	D	V	E	T	S	F	M	T	A	P	Q	V	R	E	V	M	E	A	L	V	R	H	L	W	L
Query Conservation																			.	.	.									.
Alig confidence																			.	.	.									.
Template Conservation
Template Sequence		R	F	Y	Q	V	V	N	T	F	R	Y	E	T	K	H	T	R	P	L	I	R	V	R	E	I	T	T	F	K	E	A	H	T	I	H	A	T	A	S	E	A	E	E	Q	V	E	R	A	V	E	I	Y	K	E
Template Known Secondary structure															S			B	T	T	T	B		S													S	S
Template Predicted Secondary structure
Template SS confidence
		139	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions