Job Description P21889 Confidence 82.91% Date Thu Jan 5 11:38:40 GMT 2012 Rank 123 Aligned Residues 91 % Identity 27% Template c1ltlE_ PDB info PDB header:replication Chain: E: PDB Molecule:dna replication initiator (cdc21/cdc54); PDBTitle: the dodecamer structure of mcm from archaeal m.2 thermoautotrophicum Resolution 3.00 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.															.	.	30	.	.	.	.	.	.	.	.	.	40	.	.
Predicted Secondary structure																												.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																												.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	T	E	Y	C	G	Q	L	R	L	S	H	V	G	Q	Q	V	T	L	C	G	W	V	N	R	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	D	L	G	S	L	I	F	I	D	M	R	D	R	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																												.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																												.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		N	V	I	P	L	R	E	L	R	S	K	F	I	G	K	F	V	A	V	D	G	I	V	R	K	T	D	E	I	R	P	R	I	V	K	A	V	F	E	C	R	G	C	M	R	H	H	A	V	T	Q	S	T	N	M	I	T	E	P	S	L	C	S	E	C	G	G	R	S	F	R	L	L	Q	D	E	S	E	F	L
Template Known Secondary structure						G	G	G			G	G	G	T	T																											T	T	T									S	S	S	S					S			T	T	T									G	G	G
Template Predicted Secondary structure
Template SS confidence
		93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
																						43	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	I	V	Q	V	F	F	D	P	D	R	A	D	A	L	K	L	A	S	E	L	R	N	E	F	C	I	Q	V	T	G	T	V	R	A	R	D	E	K	N	I	N	R	D	M	A	T	G	E	I	E	V	L	A	S	S	L	T	I	I
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.																				.	.	.	.
Template Conservation																																			.	.	.	.	.	.																				.	.	.	.
Template Sequence		D	T	Q	T	L	K	L	Q	E	P	L	E	N	L	S	G	G	E	Q	P	R	Q	I	T	V	V	L	E	D	D	L	V	D	.	.	.	.	.	.	T	L	T	P	G	D	I	V	R	V	T	G	T	L	R	T	V	R	D	.	.	.	.	E	R	T	K	R	F	K	N	F	I	Y	G	N	Y	T	E	F	L
Template Known Secondary structure												S	S	S			S	S												G	G	G	T	T	.	.	.	.	.	.				T	T															.	.	.	.	S	S	S														B
Template Predicted Secondary structure																																			.	.	.	.	.	.																				.	.	.	.
Template SS confidence
		173	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.							.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.					.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions