Return to main results Retrieve Phyre Job Id

Job DescriptionP21889
Confidence98.93%DateThu Jan 5 11:38:40 GMT 2012
Rank65Aligned Residues120
% Identity13%Templatec1h4tD_
PDB info PDB header:aminoacyl-trna synthetaseChain: D: PDB Molecule:prolyl-trna synthetase; PDBTitle: prolyl-trna synthetase from thermus thermophilus complexed2 with l-proline
Resolution2.9 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   138.140.........150.........160.........170.........180.... .....190.........200...... .
Predicted Secondary structure 















...











.......
Query SS confidence 














































. . .





















. . . . . . .
Query Sequence  LKTRAKITSLVRRFMDDHGFLDIETPMLTKATPEGARDYLVPSRVHK. . . GKFYALPQSPQLFKQLLMMSGF. . . . . . . D
Query Conservation   
 

 
    
 

   




 



     


           ...   
 
 




 

 

  
 ....... 
Alig confidence 














































...





















.......
Template Conservation    
   
           
  

  
 
     

  
             
 
 





          
 






Template Sequence  YAIWENIQQVLDRMFKETGHQNAYFPLFIPMSFLFSPELAVVTHAGGEELEEPLAVRPTSETVIGYMWSKWIRSWRDLPQ
Template Known Secondary structure  TT




SGGG


SS

TT
S



BGGG

Template Predicted Secondary structure 
































Template SS confidence 















































































   44.....50.........60.........70.........80.........90.........100.........110.........120...
 
   208.210.........220.... .....230.........240.........250.......
Predicted Secondary structure 







..







Query SS confidence 
















. .
































Query Sequence  RYYQIVKCFRDEDLRAD. . RQPEFTQIDVETSFMTAPQVREVMEALVRHLWL
Query Conservation 




   

 
   
 ..
 



 

 
 
      

   
 

  
  
Alig confidence 
















..
































Template Conservation 

 


 


 
   




 


 
 
 
    
 
 
  
   

  
  
Template Sequence  LLNQWGNVVRWEMRTRPFLRTSEFLWQEGHTAHATREEAEEEVRRMLSIYAR
Template Known Secondary structure 


SS
BTTTB
SSS
Template Predicted Secondary structure 










Template SS confidence 



















































   133......140.........150.........160.........170.........180....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions