Return to main results Retrieve Phyre Job Id

Job DescriptionP21889
Confidence99.02%DateThu Jan 5 11:38:40 GMT 2012
Rank61Aligned Residues116
% Identity15%Templatec1fyfB_
PDB info PDB header:ligaseChain: B: PDB Molecule:threonyl-trna synthetase; PDBTitle: crystal structure of a truncated form of threonyl-trna2 synthetase complexed with a seryl adenylate analog
Resolution1.65 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   138.140.........150.........160......... 170.........180.........190.........200.......
Predicted Secondary structure 






........





















..
Query SS confidence 































. . . . . . . .





































. .
Query Sequence  LKTRAKITSLVRRFMDDHGFLDIETPMLTKAT. . . . . . . . PEGARDYLVPSRVHKGKFYALPQSPQLFKQLLMMSGFD. .
Query Conservation   
 

 
    
 

   




 



    ........ 


              
 
 




 

 

  
  ..
Alig confidence 































........












..






















..
Template Conservation    
   
           
  

 

 

  

       
         
  ..   
 


  
    
         
Template Sequence  WTIFRELEVFVRSKLKEYQYQEVKGPFMMDRVLWEKTGHWDNYKDAMFTTSSE. . NREYCIKPMNCPGHVQIFNQGLKSY
Template Known Secondary structure  TT




STGGG

T..T
S
STSS

BG
Template Predicted Secondary structure 

















..








Template SS confidence 















































































   271........280.........290.........300.........310.........320... ......330.........340........
 
   208.210.........220.... .....230.........240. ........250.....
Predicted Secondary structure  .....







....







......
Query SS confidence  . . . . .
















. . . .
















. . . . . .













Query Sequence  . . . . . RYYQIVKCFRDEDLRAD. . . . RQPEFTQIDVETSFMTA. . . . . . PQVREVMEALVRHL
Query Conservation  .....




   

 
   
 ....
 



 

 
 
    ......  

   
 

  
Alig confidence  .....
















....
















......













Template Conservation    

 
 
 

  

 
      

 
 


 
   
  
          
 
         
Template Sequence  RDLPLRMAEFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEEQIRDEVNGCIRLVYDMYSTF
Template Known Secondary structure  GG
S



GGG
BTTTB
S
GGG
Template Predicted Secondary structure 

















Template SS confidence 






























































   349350.........360.........370.........380.........390.........400.........410.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions