 |
Job Description | P0AFJ1 | Confidence | 57.90% | Date | Thu Jan 5 11:26:29 GMT 2012 |
Rank | 41 | Aligned Residues | 24 |
% Identity | 33% | Template | d2f4ma1 |
SCOP info | Cysteine proteinases
| Cysteine proteinases
| Transglutaminase core
|
Resolution | 1.85 |
|
  |   |
4 | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
20 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|  |  |  |
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
Query Sequence |   |
P | H | C | P | K | C | N | S | E | Y | T | Y | E | D | N | G | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
M | Y | I | C | P | E | C | A |
Query Conservation |   |
|   |
|
|   |
|   |   |
|   |
|
|   |
|   |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |
|
|   |
|
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |
|   |   |
|
|   |
|   |
|   |   |
|   |
Template Sequence |   |
I | V | C | S | K | C | G | G | E | T | R | S | R | D | E | A | L | L | P | N | D | D | E | L | K | W | G | A | K | N | V | E | N | H | Y | C | D | A | C | Q |
Template Known Secondary structure |   |
|
|
| T | T | T |
|
|
|
|  |  |
| S | S |
| B |
|
|
| S |  |  |  |  | T | T |
|
|
|  |  |  |  |  |  | T | T | T | T |
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
245 | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|