 |
| Job Description | P0AFJ1 | | Confidence | 24.99% | Date | Thu Jan 5 11:26:29 GMT 2012 |
| Rank | 109 | Aligned Residues | 27 |
| % Identity | 19% | Template | c3jyw9_ |
| PDB info |
PDB header:ribosome | Chain: 9: PDB Molecule:60s ribosomal protein l43; |
PDBTitle: structure of the 60s proteins for eukaryotic ribosome based on cryo-em2 map of thermomyces lanuginosus ribosome at 8.9a resolution
|
| Resolution | 8.90 Å |
|
| | |
5 | . | . | . | . | 10 | . | . | . | . | . | . | . | |
. | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . |
| Predicted Secondary structure | |
|
|
|
|
|
|
|
|
|  | |  |
| . |
|
| | | |
|
|
|
|
|
|
|
|
|
| Query SS confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence | |
H | C | P | K | C | N | S | E | Y | T | Y | E | D | . |
N | G | M | Y | I | C | P | E | C | A | Y | E | W | N |
| Query Conservation | |
|
|
| |
| | |
| |
|
| |
| . | | | | |
|
| |
|
| | |
|
| |
| Alig confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation | |
|
|
| |
|
|
| | |
|
|
| | | |
|
|
| |
| |
|
|
| | | |
|
| Template Sequence | |
D | C | S | F | C | G | K | K | T | V | K | R | G | A | A | G | I | W | T | C | S | C | C | K | K | T | V | A |
| Template Known Secondary structure | |
|
| S | S |
|
| S | S |
| B | S | B |
| S | S | S |
| B |
|
| S | S | S |
|
|
|
|
|
| Template Predicted Secondary structure | |
|
|
|
|
|
|
|
| | | | | | | | | | | | |
|
|
|
|
| | | |
| Template SS confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| | |
38 | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . |
| |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
| |
|
|
|
