 |
Job Description | P0AFJ1 | Confidence | 42.13% | Date | Thu Jan 5 11:26:29 GMT 2012 |
Rank | 58 | Aligned Residues | 41 |
% Identity | 22% | Template | c2qkdA_ |
PDB info |
PDB header:signaling protein, cell cycle | Chain: A: PDB Molecule:zinc finger protein zpr1; |
PDBTitle: crystal structure of tandem zpr1 domains
|
Resolution | 2.00 Å |
|
  |   |
5 | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | |
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|  |  |  |
|
|
|  | . | . | . | . | . | . | . | . | . | . | . | . |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
H | C | P | K | C | N | S | E | Y | T | Y | E | D | N | G | M | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
Y | I | C | P | E | C | A | Y | E | W | N | D | A | E | P | A | Q | E | S | D | E | L | I | V | K |
Query Conservation |   |
  |
|
|   |
|   |   |
|   |
|
|   |
|   |   |   | . | . | . | . | . | . | . | . | . | . | . | . |   |
|
|   |
|
|   |   |
|
|   |   |
|   |   |   |   |   |   |   |   |   |
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|   |
|
|   |   |   |   |   |   |   |   |   |   |   |
|
|   |
|   |   |
|
|
|
|
|   |   |
|   |   |
|
|
|
|   |   |
|
|
|   |   |
|   |   |   |
|
|
|   |
|
Template Sequence |   |
N | C | P | E | C | N | A | P | A | Q | T | N | M | K | L | V | Q | I | P | H | F | K | E | V | I | I | M | A | T | N | C | E | N | C | G | H | R | T | N | E | V | K | S | G | G | A | V | E | P | L | G | T | R |
Template Known Secondary structure |   |
|
| T | T | T |
|
| T | T |
|  |  |  |  |  |  |
|
| T | T | S |
|
|  |  |  |  |  |  |  |
| S | S | S |
|
|  |  |  |  |  |  |  |
| S | S | S |
|
|
|  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |
|
|
|
|
|
|
|  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
258 | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|