Emaill.a.kelley@imperial.ac.uk
DescriptionP0ABS1
DateThu Jan 5 11:16:12 GMT 2012
Unique Job ID6e6a8d698f5fce17

Detailed template information 

#Template Alignment Coverage3D Model Confidence% i.d. Template Information
1c1tjlD_



100.0 100 PDB header:transcription
Chain: D: PDB Molecule:dnak suppressor protein;
PDBTitle: crystal structure of transcription factor dksa from e. coli
2c2kq9A_



99.9 21 PDB header:transcription
Chain: A: PDB Molecule:dnak suppressor protein;
PDBTitle: solution structure of dnak suppressor protein from2 agrobacterium tumefaciens c58. northeast structural3 genomics consortium target att12/ontario center for4 structural proteomics target atc0888
3d1tjla1



99.9 100 Fold:Long alpha-hairpin
Superfamily:DnaK suppressor protein DksA, alpha-hairpin domain
Family:DnaK suppressor protein DksA, alpha-hairpin domain
4c2kgoA_



99.7 25 PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:uncharacterized protein ybii;
PDBTitle: solution nmr structure of zn finger protein ybil from escherichia2 coli. nesg target et107, ocsp target ec0402
5d1tjla2



99.5 100 Fold:Glucocorticoid receptor-like (DNA-binding domain)
Superfamily:Glucocorticoid receptor-like (DNA-binding domain)
Family:Prokaryotic DksA/TraR C4-type zinc finger
6c3mhsE_



77.0 29 PDB header:hydrolase/transcription regulator/protei
Chain: E: PDB Molecule:saga-associated factor 73;
PDBTitle: structure of the saga ubp8/sgf11/sus1/sgf73 dub module bound to2 ubiquitin aldehyde
7c1dvbA_



66.4 13 PDB header:electron transport
Chain: A: PDB Molecule:rubrerythrin;
PDBTitle: rubrerythrin
8c2gviA_



66.4 14 PDB header:oxidoreductase
Chain: A: PDB Molecule:conserved hypothetical protein;
PDBTitle: crystal structure of a putative formylmethanofuran dehydrogenase2 subunit e (ta1109) from thermoplasma acidophilum at 1.87 a resolution
9c3d00A_



60.7 27 PDB header:metal binding protein
Chain: A: PDB Molecule:tungsten formylmethanofuran dehydrogenase subunit e;
PDBTitle: crystal structure of a tungsten formylmethanofuran dehydrogenase2 subunit e (fmde)-like protein (syn_00638) from syntrophus3 aciditrophicus at 1.90 a resolution
10c2hr5B_



58.6 14 PDB header:metal binding protein
Chain: B: PDB Molecule:rubrerythrin;
PDBTitle: pf1283- rubrerythrin from pyrococcus furiosus iron bound form
11d1x4ka1



50.1 20 Fold:Glucocorticoid receptor-like (DNA-binding domain)
Superfamily:Glucocorticoid receptor-like (DNA-binding domain)
Family:LIM domain
12d1xpaa2



42.5 55 Fold:Glucocorticoid receptor-like (DNA-binding domain)
Superfamily:Glucocorticoid receptor-like (DNA-binding domain)
Family:DNA repair factor XPA DNA- and RPA-binding domain, N-terminal subdomain
13d2cura1



41.9 27 Fold:Glucocorticoid receptor-like (DNA-binding domain)
Superfamily:Glucocorticoid receptor-like (DNA-binding domain)
Family:LIM domain
14d1kjna_



36.9 11 Fold:Hypothetical protein MTH777 (MT0777)
Superfamily:Hypothetical protein MTH777 (MT0777)
Family:Hypothetical protein MTH777 (MT0777)
15c3u1dA_



33.0 17 PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:uncharacterized protein;
PDBTitle: the structure of a protein with a gntr superfamily winged-helix-turn-2 helix domain from halomicrobium mukohataei.
16c1grjA_



32.9 13 PDB header:transcription regulation
Chain: A: PDB Molecule:grea protein;
PDBTitle: grea transcript cleavage factor from escherichia coli
17d1wyha1



30.7 23 Fold:Glucocorticoid receptor-like (DNA-binding domain)
Superfamily:Glucocorticoid receptor-like (DNA-binding domain)
Family:LIM domain
18c1yuzB_



28.6 17 PDB header:oxidoreductase
Chain: B: PDB Molecule:nigerythrin;
PDBTitle: partially reduced state of nigerythrin
19c2f5qA_



24.7 29 PDB header:hydrolase/dna
Chain: A: PDB Molecule:formamidopyrimidine-dna glycosidase;
PDBTitle: catalytically inactive (e3q) mutm crosslinked to oxog:c2 containing dna cc2
20d1j2oa1



23.7 29 Fold:Glucocorticoid receptor-like (DNA-binding domain)
Superfamily:Glucocorticoid receptor-like (DNA-binding domain)
Family:LIM domain
21d2czra1



not modelled 22.9 50 Fold:Restriction endonuclease-like
Superfamily:TBP-interacting protein-like
Family:TBP-interacting protein-like
22c2opfA_



not modelled 22.7 32 PDB header:hydrolase/dna
Chain: A: PDB Molecule:endonuclease viii;
PDBTitle: crystal structure of the dna repair enzyme endonuclease-viii (nei)2 from e. coli (r252a) in complex with ap-site containing dna substrate
23d1lpba2



not modelled 22.7 27 Fold:Knottins (small inhibitors, toxins, lectins)
Superfamily:Colipase-like
Family:Colipase-like
24c1k82D_



not modelled 22.6 29 PDB header:hydrolase/dna
Chain: D: PDB Molecule:formamidopyrimidine-dna glycosylase;
PDBTitle: crystal structure of e.coli formamidopyrimidine-dna2 glycosylase (fpg) covalently trapped with dna
25d1weoa_



not modelled 21.9 60 Fold:RING/U-box
Superfamily:RING/U-box
Family:RING finger domain, C3HC4
26d1nf4a_



not modelled 21.3 11 Fold:Ferritin-like
Superfamily:Ferritin-like
Family:Ferritin
27c2d8zA_



not modelled 21.2 23 PDB header:signaling protein, structural protein
Chain: A: PDB Molecule:four and a half lim domains 2;
PDBTitle: solution structure of the third lim domain of four and a2 half lim domains protein 2 (fhl-2)
28c2gb5B_



not modelled 21.2 35 PDB header:hydrolase
Chain: B: PDB Molecule:nadh pyrophosphatase;
PDBTitle: crystal structure of nadh pyrophosphatase (ec 3.6.1.22) (1790429) from2 escherichia coli k12 at 2.30 a resolution
29d1rutx3



not modelled 20.5 45 Fold:Glucocorticoid receptor-like (DNA-binding domain)
Superfamily:Glucocorticoid receptor-like (DNA-binding domain)
Family:LIM domain
30c1ee8A_



not modelled 20.2 29 PDB header:dna binding protein
Chain: A: PDB Molecule:mutm (fpg) protein;
PDBTitle: crystal structure of mutm (fpg) protein from thermus thermophilus hb8
31c2l3kA_



not modelled 19.9 27 PDB header:oncoprotein
Chain: A: PDB Molecule:rhombotin-2, linker, lim domain-binding protein 1;
PDBTitle: solution structure of lmo2(lim2)-ldb1(lid)
32c2darA_



not modelled 19.8 17 PDB header:metal binding protein
Chain: A: PDB Molecule:pdz and lim domain protein 5;
PDBTitle: solution structure of first lim domain of enigma-like pdz2 and lim domains protein
33c1wjvA_



not modelled 19.8 31 PDB header:dna binding protein
Chain: A: PDB Molecule:cell growth regulating nucleolar protein lyar;
PDBTitle: solution structure of the n-terminal zinc finger domain of2 mouse cell growth regulating nucleolar protein lyar
34c3a44D_



not modelled 19.6 22 PDB header:metal binding protein
Chain: D: PDB Molecule:hydrogenase nickel incorporation protein hypa;
PDBTitle: crystal structure of hypa in the dimeric form
35d1x63a2



not modelled 19.4 21 Fold:Glucocorticoid receptor-like (DNA-binding domain)
Superfamily:Glucocorticoid receptor-like (DNA-binding domain)
Family:LIM domain
36c1nnjA_



not modelled 18.7 32 PDB header:hydrolase
Chain: A: PDB Molecule:formamidopyrimidine-dna glycosylase;
PDBTitle: crystal structure complex between the lactococcus lactis fpg and an2 abasic site containing dna
37c1j2oA_



not modelled 18.5 23 PDB header:metal binding protein
Chain: A: PDB Molecule:fusion of rhombotin-2 and lim domain-binding
PDBTitle: structure of flin2, a complex containing the n-terminal lim2 domain of lmo2 and ldb1-lid
38c2qgpA_



not modelled 18.5 27 PDB header:hydrolase
Chain: A: PDB Molecule:hnh endonuclease;
PDBTitle: x-ray structure of the nhn endonuclease from geobacter2 metallireducens. northeast structural genomics consortium3 target gmr87.
39d2cupa3



not modelled 18.1 44 Fold:Glucocorticoid receptor-like (DNA-binding domain)
Superfamily:Glucocorticoid receptor-like (DNA-binding domain)
Family:LIM domain
40d2ak3a2



not modelled 17.9 20 Fold:Rubredoxin-like
Superfamily:Microbial and mitochondrial ADK, insert "zinc finger" domain
Family:Microbial and mitochondrial ADK, insert "zinc finger" domain
41c3cm6A_



not modelled 17.4 31 PDB header:hydrolase, apoptosis
Chain: A: PDB Molecule:cell death-related nuclease 4;
PDBTitle: crystal structure of cell-death related nuclease 4 (crn-4)2 bound with er
42d1rutx1



not modelled 17.1 33 Fold:Glucocorticoid receptor-like (DNA-binding domain)
Superfamily:Glucocorticoid receptor-like (DNA-binding domain)
Family:LIM domain
43d1e4va2



not modelled 16.9 30 Fold:Rubredoxin-like
Superfamily:Microbial and mitochondrial ADK, insert "zinc finger" domain
Family:Microbial and mitochondrial ADK, insert "zinc finger" domain
44c1x4lA_



not modelled 16.6 25 PDB header:metal binding protein
Chain: A: PDB Molecule:skeletal muscle lim-protein 3;
PDBTitle: solution structure of lim domain in four and a half lim2 domains protein 2
45c2d8xA_



not modelled 16.5 17 PDB header:structural protein, cell cycle
Chain: A: PDB Molecule:protein pinch;
PDBTitle: solution structure of the second lim domain of particularly2 interesting new cys-his protein (pinch)
46d2dara2



not modelled 16.4 33 Fold:Glucocorticoid receptor-like (DNA-binding domain)
Superfamily:Glucocorticoid receptor-like (DNA-binding domain)
Family:LIM domain
47c1d4uA_



not modelled 16.0 33 PDB header:dna binding protein
Chain: A: PDB Molecule:nucleotide excision repair protein xpa (xpa-mbd);
PDBTitle: interactions of human nucleotide excision repair protein2 xpa with rpa70 and dna: chemical shift mapping and 15n nmr3 relaxation studies
48c2cuqA_



not modelled 16.0 17 PDB header:structural genomics, unknown function
Chain: A: PDB Molecule:four and a half lim domains 3;
PDBTitle: solution structure of second lim domain from human skeletal2 muscle lim-protein 2
49c1wyhA_



not modelled 15.2 24 PDB header:metal binding protein
Chain: A: PDB Molecule:skeletal muscle lim-protein 2;
PDBTitle: solution structure of the lim domain from human skeletal2 muscle lim-protein 2
50c2etnA_



not modelled 15.1 18 PDB header:transcription
Chain: A: PDB Molecule:anti-cleavage anti-grea transcription factor
PDBTitle: crystal structure of thermus aquaticus gfh1
51c2i61A_



not modelled 14.8 33 PDB header:toxin
Chain: A: PDB Molecule:insect toxin 2;
PDBTitle: depressant anti-insect neurotoxin, lqhit2 from leiurus2 quinquestriatus hebraeus
52d1ee8a3



not modelled 14.4 28 Fold:Glucocorticoid receptor-like (DNA-binding domain)
Superfamily:Glucocorticoid receptor-like (DNA-binding domain)
Family:C-terminal, Zn-finger domain of MutM-like DNA repair proteins
53c2o03A_



not modelled 14.3 57 PDB header:gene regulation
Chain: A: PDB Molecule:probable zinc uptake regulation protein furb;
PDBTitle: crystal structure of furb from m. tuberculosis- a zinc uptake2 regulator
54d1x4la2



not modelled 14.2 44 Fold:Glucocorticoid receptor-like (DNA-binding domain)
Superfamily:Glucocorticoid receptor-like (DNA-binding domain)
Family:LIM domain
55c2curA_



not modelled 13.9 23 PDB header:metal binding protein
Chain: A: PDB Molecule:skeletal muscle lim-protein 1;
PDBTitle: solution structure of skeletal muscle lim-protein 1
56d1kx5b_



not modelled 13.8 18 Fold:Histone-fold
Superfamily:Histone-fold
Family:Nucleosome core histones
57d1zina2



not modelled 13.8 56 Fold:Rubredoxin-like
Superfamily:Microbial and mitochondrial ADK, insert "zinc finger" domain
Family:Microbial and mitochondrial ADK, insert "zinc finger" domain
58c3h0gL_



not modelled 13.7 29 PDB header:transcription
Chain: L: PDB Molecule:dna-directed rna polymerases i, ii, and iii
PDBTitle: rna polymerase ii from schizosaccharomyces pombe
59c2xigA_



not modelled 13.6 33 PDB header:transcription
Chain: A: PDB Molecule:ferric uptake regulation protein;
PDBTitle: the structure of the helicobacter pylori ferric uptake2 regulator fur reveals three functional metal binding sites
60d2cuqa1



not modelled 13.6 17 Fold:Glucocorticoid receptor-like (DNA-binding domain)
Superfamily:Glucocorticoid receptor-like (DNA-binding domain)
Family:LIM domain
61c2a20A_



not modelled 13.6 29 PDB header:metal binding protein
Chain: A: PDB Molecule:regulating synaptic membrane exocytosis protein
PDBTitle: solution structure of rim2 zinc finger domain
62d1id3b_



not modelled 13.5 18 Fold:Histone-fold
Superfamily:Histone-fold
Family:Nucleosome core histones
63d1s3ga2



not modelled 13.3 44 Fold:Rubredoxin-like
Superfamily:Microbial and mitochondrial ADK, insert "zinc finger" domain
Family:Microbial and mitochondrial ADK, insert "zinc finger" domain
64d1p3ja2



not modelled 13.3 44 Fold:Rubredoxin-like
Superfamily:Microbial and mitochondrial ADK, insert "zinc finger" domain
Family:Microbial and mitochondrial ADK, insert "zinc finger" domain
65d1x3ha1



not modelled 13.2 24 Fold:Glucocorticoid receptor-like (DNA-binding domain)
Superfamily:Glucocorticoid receptor-like (DNA-binding domain)
Family:LIM domain
66d1akya2



not modelled 13.1 10 Fold:Rubredoxin-like
Superfamily:Microbial and mitochondrial ADK, insert "zinc finger" domain
Family:Microbial and mitochondrial ADK, insert "zinc finger" domain
67c1x63A_



not modelled 13.0 21 PDB header:contractile protein
Chain: A: PDB Molecule:skeletal muscle lim-protein 1;
PDBTitle: solution structure of the second lim domain of skeletal2 muscle lim protein 1
68d2b3ca_



not modelled 12.6 40 Fold:Knottins (small inhibitors, toxins, lectins)
Superfamily:Scorpion toxin-like
Family:Long-chain scorpion toxins
69c2fe3B_



not modelled 12.6 43 PDB header:dna binding protein
Chain: B: PDB Molecule:peroxide operon regulator;
PDBTitle: the crystal structure of bacillus subtilis perr-zn reveals a novel2 zn(cys)4 structural redox switch
70c2ko5A_



not modelled 12.5 20 PDB header:transcription
Chain: A: PDB Molecule:ring finger protein z;
PDBTitle: nmr solution structure of lfv-z
71d1bboa1



not modelled 12.4 67 Fold:beta-beta-alpha zinc fingers
Superfamily:beta-beta-alpha zinc fingers
Family:Classic zinc finger, C2H2
72d1bmra_



not modelled 12.2 33 Fold:Knottins (small inhibitors, toxins, lectins)
Superfamily:Scorpion toxin-like
Family:Long-chain scorpion toxins
73d1xx6a2



not modelled 12.1 38 Fold:Glucocorticoid receptor-like (DNA-binding domain)
Superfamily:Glucocorticoid receptor-like (DNA-binding domain)
Family:Type II thymidine kinase zinc finger
74c3mwmA_



not modelled 12.0 57 PDB header:transcription
Chain: A: PDB Molecule:putative metal uptake regulation protein;
PDBTitle: graded expression of zinc-responsive genes through two regulatory2 zinc-binding sites in zur
75d1twfj_



not modelled 11.9 56 Fold:DNA/RNA-binding 3-helical bundle
Superfamily:RNA polymerase subunit RPB10
Family:RNA polymerase subunit RPB10
76c1x4kA_



not modelled 11.8 21 PDB header:metal binding protein
Chain: A: PDB Molecule:skeletal muscle lim-protein 3;
PDBTitle: solution structure of lim domain in lim-protein 3
77c2i5oA_



not modelled 11.6 40 PDB header:transferase
Chain: A: PDB Molecule:dna polymerase eta;
PDBTitle: solution structure of the ubiquitin-binding zinc finger2 (ubz) domain of the human dna y-polymerase eta
78c2p4vA_



not modelled 11.5 21 PDB header:transcription
Chain: A: PDB Molecule:transcription elongation factor greb;
PDBTitle: crystal structure of the transcript cleavage factor, greb2 at 2.6a resolution
79d2i9ca1



not modelled 11.1 30 Fold:alpha-alpha superhelix
Superfamily:ARM repeat
Family:RPA1889-like
80c1x64A_



not modelled 11.0 10 PDB header:contractile protein
Chain: A: PDB Molecule:alpha-actinin-2 associated lim protein;
PDBTitle: solution structure of the lim domain of alpha-actinin-22 associated lim protein
81d1jzaa_



not modelled 11.0 40 Fold:Knottins (small inhibitors, toxins, lectins)
Superfamily:Scorpion toxin-like
Family:Long-chain scorpion toxins
82c2egqA_



not modelled 10.9 24 PDB header:structural protein
Chain: A: PDB Molecule:fhl1 protein;
PDBTitle: solution structure of the fourth lim domain from human four2 and a half lim domains 1
83c2a8vA_



not modelled 10.9 23 PDB header:protein/rna
Chain: A: PDB Molecule:rna binding domain of rho transcription
PDBTitle: rho transcription termination factor/rna complex
84c1x61A_



not modelled 10.8 17 PDB header:cell adhesion
Chain: A: PDB Molecule:thyroid receptor interacting protein 6;
PDBTitle: solution structure of the first lim domain of thyroid2 receptor interacting protein 6 (trip6)
85c2k5cA_



not modelled 10.8 31 PDB header:metal binding protein
Chain: A: PDB Molecule:uncharacterized protein pf0385;
PDBTitle: nmr structure for pf0385
86d1ef4a_



not modelled 10.6 44 Fold:DNA/RNA-binding 3-helical bundle
Superfamily:RNA polymerase subunit RPB10
Family:RNA polymerase subunit RPB10
87c3jueA_



not modelled 10.5 15 PDB header:protein transport/endocytosis
Chain: A: PDB Molecule:arfgap with coiled-coil, ank repeat and ph domain-
PDBTitle: crystal structure of arfgap and ank repeat domain of acap1
88d1cn2a_



not modelled 10.4 33 Fold:Knottins (small inhibitors, toxins, lectins)
Superfamily:Scorpion toxin-like
Family:Long-chain scorpion toxins
89d2huec1



not modelled 10.4 18 Fold:Histone-fold
Superfamily:Histone-fold
Family:Nucleosome core histones
90d1a62a2



not modelled 10.4 28 Fold:OB-fold
Superfamily:Nucleic acid-binding proteins
Family:Cold shock DNA-binding domain-like
91d1vnba_



not modelled 10.3 40 Fold:Knottins (small inhibitors, toxins, lectins)
Superfamily:Scorpion toxin-like
Family:Long-chain scorpion toxins
92d1nh5a_



not modelled 10.3 25 Fold:Knottins (small inhibitors, toxins, lectins)
Superfamily:Scorpion toxin-like
Family:Long-chain scorpion toxins
93c1x62A_



not modelled 10.2 33 PDB header:structural protein
Chain: A: PDB Molecule:c-terminal lim domain protein 1;
PDBTitle: solution structure of the lim domain of carboxyl terminal2 lim domain protein 1
94d2sn3a_



not modelled 10.2 40 Fold:Knottins (small inhibitors, toxins, lectins)
Superfamily:Scorpion toxin-like
Family:Long-chain scorpion toxins
95d2yt9a2



not modelled 10.1 67 Fold:beta-beta-alpha zinc fingers
Superfamily:beta-beta-alpha zinc fingers
Family:Classic zinc finger, C2H2
96d2cu8a1



not modelled 10.0 20 Fold:Glucocorticoid receptor-like (DNA-binding domain)
Superfamily:Glucocorticoid receptor-like (DNA-binding domain)
Family:LIM domain
97c3gn5B_



not modelled 10.0 27 PDB header:dna binding protein
Chain: B: PDB Molecule:hth-type transcriptional regulator mqsa (ygit/b3021);
PDBTitle: structure of the e. coli protein mqsa (ygit/b3021)
98c1x3hA_



not modelled 9.9 10 PDB header:metal binding protein
Chain: A: PDB Molecule:leupaxin;
PDBTitle: solution structure of the lim domain of human leupaxin
99c2co8A_



not modelled 9.9 27 PDB header:metal binding protein
Chain: A: PDB Molecule:nedd9 interacting protein with calponin homology
PDBTitle: solution structures of the lim domain of human nedd92 interacting protein with calponin homology and lim domains