Job Description P0ABS1 Confidence 15.08% Date Thu Jan 5 11:16:12 GMT 2012 Rank 50 Aligned Residues 66 % Identity 18% Template c2etnA_ PDB info PDB header:transcription Chain: A: PDB Molecule:anti-cleavage anti-grea transcription factor PDBTitle: crystal structure of thermus aquaticus gfh1 Resolution 3.30 Å

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		31	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	M	N	E	A	Q	L	A	H	F	R	R	I	L	E	A	W	R	N	Q	L	R	D	E	V	D	R	T	V	T	H	M	Q	D	E	A	A	N	F	P	D	P	V	D	R	A	A	Q	E	E	E	F	S	L	E	L	R	N	R	D	R	E	R	K	L	I	K	K	I	E	K	T	L	K	K
Query Conservation
Alig confidence																																																							.	.	.	.	.	.	.	.	.
Template Conservation																																																							.	.	.	.	.	.	.	.	.
Template Sequence		K	L	T	K	A	G	Y	E	R	L	M	K	Q	L	E	Q	E	R	E	R	L	Q	E	A	T	K	I	L	Q	E	L	M	E	S	S	D	D	Y	D	D	S	G	L	E	A	A	K	Q	E	K	A	R	I	.	.	.	.	.	.	.	.	.	E	A	R	I	D	S	L	E	D	V	L	S	R
Template Known Secondary structure																																	T	T	S		S	S			S	T													.	.	.	.	.	.	.	.	.											T	T	T
Template Predicted Secondary structure																																																							.	.	.	.	.	.	.	.	.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.										.	60	.	.	.	.	.	.	.	.	.	70	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions