Job Description P0ABS1 Confidence 100.00% Date Thu Jan 5 11:16:12 GMT 2012 Rank 1 Aligned Residues 145 % Identity 100% Template c1tjlD_ PDB info PDB header:transcription Chain: D: PDB Molecule:dnak suppressor protein; PDBTitle: crystal structure of transcription factor dksa from e. coli Resolution 2.00 Å

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		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	K	T	S	S	L	S	I	L	A	I	A	G	V	E	P	Y	Q	E	K	P	G	E	E	Y	M	N	E	A	Q	L	A	H	F	R	R	I	L	E	A	W	R	N	Q	L	R	D	E	V	D	R	T	V	T	H	M	Q	D	E	A	A	N	F	P	D	P	V	D	R	A	A	Q	E	E	E	F	S	L	E	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	K	T	S	S	L	S	I	L	A	I	A	G	V	E	P	Y	Q	E	K	P	G	E	E	Y	M	N	E	A	Q	L	A	H	F	R	R	I	L	E	A	W	R	N	Q	L	R	D	E	V	D	R	T	V	T	H	M	Q	D	E	A	A	N	F	P	D	P	V	D	R	A	A	Q	E	E	E	F	S	L	E	L
Template Known Secondary structure					S	S							T	T								T	T			T	T																																				S				G	G	G
Template Predicted Secondary structure
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	N	R	D	R	E	R	K	L	I	K	K	I	E	K	T	L	K	K	V	E	D	E	D	F	G	Y	C	E	S	C	G	V	E	I	G	I	R	R	L	E	A	R	P	T	A	D	L	C	I	D	C	K	T	L	A	E	I	R	E	K	Q	M	A	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	N	R	D	R	E	R	K	L	I	K	K	I	E	K	T	L	K	K	V	E	D	E	D	F	G	Y	C	E	S	C	G	V	E	I	G	I	R	R	L	E	A	R	P	T	A	D	L	C	I	D	C	K	T	L	A	E	I	R	E	K	Q	M	A	G
Template Known Secondary structure																							T	T			S	B		S	S	S	S		B										T	T			S
Template Predicted Secondary structure
Template SS confidence
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions