Return to main results Retrieve Phyre Job Id

Job DescriptionP77263
Confidence99.91%DateThu Jan 5 12:26:58 GMT 2012
Rank9Aligned Residues115
% Identity20%Templated2co7b1
SCOP infoImmunoglobulin-like beta-sandwich PapD-like Pilus chaperone
Resolution1.8

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   22.......30.........40.........50.........60.........70.........80.........90.........100.
Predicted Secondary structure 































Query SS confidence 















































































Query Sequence  APLTQAISVGNLTFSLPSETDFVSKRVVNNNKSARIYRIAISAIDSPGSSELRTRPVDGELLFAPRQLALQAGESEYFKF
Query Conservation     



 
 
  
         

 
 
       


 
                   
   
    
 

  
 


Alig confidence 















































.........






















Template Conservation 

    
 
  



         
 
 
    
 


 
        .........   


 


  
 
   
 


Template Sequence  ATKLFSVKLGATRVIYHAGTAGATLSVSNPQNYPILVQSSVKAADKSS. . . . . . . . . PAPFLVMPPLFRLEANQQSQLRI
Template Known Secondary structure 






S
STTSS


SSS
TTSSS.........B
SSS
TT
Template Predicted Secondary structure 





















.........









Template SS confidence 















































































   8.10.........20.........30.........40.........50..... ....60.........70........
 
   102.... ...110.........120.........130.........140.........150.....
Predicted Secondary structure 


..
























Query SS confidence 




. .
















































Query Sequence  YYHGP. . RDNRERYYRVSFREVPTRNHTRRSPTGGVVSTEPVVVMDTILVVRPRQV
Query Conservation       ..    
  


    

               
 
 
   
 
 


   
Alig confidence 




..




















..........

















Template Conservation        

 



   
 
  

     ..........
       






  
Template Sequence  VRTGGDMPTDRETLQWVCIKAVPPETLD. . . . . . . . . . LNLSINACDKLIFRPDAV
Template Known Secondary structure 





SSS






..........




TT
Template Predicted Secondary structure 














..........





Template SS confidence 























































   7980.........90.........100...... ...110.........120....
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions