|   |
25 | . | . | . | . | 30 | . | . | |
. | . | . | . | . | . | . | |
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40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 |
Predicted Secondary structure |   |
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|  |  |  |  |  |  | . |  |  |  |  |  |
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| . | . | . |
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|  |  |  |  |  |  |  |  |
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Query SS confidence |   |
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Query Sequence |   |
T | Q | A | I | S | V | G | N | . |
L | T | F | S | L | P | S | . |
. |
. |
E | T | D | F | V | S | K | R | V | V | N | N | N | K | S | A | R | I | Y | R | I | A | I | S | A | I | D | S | P | G | S | S | E | L | R | T | R | P | V | D | G | E | L | L | F | A | P | R | Q | L | A | L | Q | A | G | E | S | E | Y | F | K |
Query Conservation |   |
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|   |
|   |
| . |   |   |
|   |   |   |   | . | . | . |   |   |   |   |   |
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|   |
|   |
|   |   |   |   |   |   |   |
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|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |
|   |
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|   |   |
|   |
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Alig confidence |   |
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| . |
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| . | . | . |
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| . | . | . | . | . | . | . | . | . | . | . | . | . | . |
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Template Conservation |   |
  |   |   |
|   |
|   |
|   |   |   |
|   |
|   |   |
|   |   |   |   |   |   |   |   |
|   |
|   |
|   |
|   |   |   |
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|   | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |
|   |
|   |
|   |   |
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|   |
|   |   |   |   |   |
|   |
Template Sequence |   |
P | G | D | I | Q | T | Q | P | G | T | K | I | V | F | N | A | P | Y | D | D | K | H | T | Y | H | I | K | V | I | N | S | S | A | R | R | I | G | Y | G | I | K | T | T | N | . |
. |
. |
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. |
. |
. |
. |
. |
. |
M | K | R | L | G | V | D | P | P | C | G | V | L | D | P | K | E | A | V | L | L | A |
Template Known Secondary structure |   |
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|  |  |  |  | S | S | S |
|  |  |  |  | S |
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| S | S |
|  |  |  |  |  |  |  |  |  |
| S | S | S |
|  |  |  |  |  |  |  | S |
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | T | T | T |  |  |  |  | S | S |  |  |  |  |
| T | T |
|  |  |  |  |  |
Template Predicted Secondary structure |   |
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|  |  |  |  |  |
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|  |  |  |  |  |
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|  |  |  |  |  |  |  |  |  |  |
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|  |  |  |  |  |  |  |
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| . | . | . | . | . | . | . | . | . | . | . | . | . | . |
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|  |  |  |  |  |
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|  |  |  |  |
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|  |  |  |  |  |
Template SS confidence |   |
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  |   |
6 | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | |
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50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . |
  |
  |   |
101 | . | . | . | . | . | . | . | . | 110 | . | . | . | |
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. | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . |
Predicted Secondary structure |   |
 |  |  |
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|  |  | . | . | . | . |  |  |  |  |  |  |  |
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|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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Query SS confidence |   |
|
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| . |
. |
. |
. |
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Query Sequence |   |
F | Y | Y | H | G | P | R | D | N | R | E | R | Y | . |
. |
. |
. |
Y | R | V | S | F | R | E | V | P | T | R | N | H | T | R | R | S | P | T | G | G | V | V | S | T | E | P | V | V | V | M | D | T | I | L | V | V | R | P |
Query Conservation |   |
|   |   |   |   |   |   |   |   |   |
|   |   | . | . | . | . |
|
|
|   |   |   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |
|   |   |   |
|   |
|   |
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Alig confidence |   |
|
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| . | . | . | . |
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| . |
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Template Conservation |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|   |
|   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   | . |   |   |   |
|   |   |
|   |
|   |
|   |
|
Template Sequence |   |
V | S | C | D | A | F | A | F | G | Q | E | D | T | N | N | D | R | I | T | V | E | W | T | N | T | P | D | G | A | A | K | Q | F | R | R | E | W | F | Q | G | D | G | . |
M | V | R | R | K | N | L | P | I | E | Y | N | P |
Template Known Secondary structure |   |
 |  |  |
|
|
|
| G | G | G | S |
|
| T | T |
|  |  |  |  |  |  |  |  |
|
| S | S |
|
| S | S |
|
| G | G | G | G | T | S | S | S | . |
|
|  |  |  |  |  |  |  |  |  |  |
|
Template Predicted Secondary structure |   |
 |  |  |
|
|
|
|
|
|  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
| . |
|  |  |  |  |  |  |  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
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|
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|
  |   |
72 | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | |
. | . | . | . | . | . | 120 | . | . | . | . | . | . |
  |