 |
Job Description | P77263 | Confidence | 44.11% | Date | Thu Jan 5 12:26:58 GMT 2012 |
Rank | 45 | Aligned Residues | 79 |
% Identity | 14% | Template | c3rgbA_ |
PDB info |
PDB header:oxidoreductase | Chain: A: PDB Molecule:methane monooxygenase subunit b2; |
PDBTitle: crystal structure of particulate methane monooxygenase from2 methylococcus capsulatus (bath)
|
Resolution | 2.80 Å |
|
 |
  |   |
27 | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | |
|
|
. | . | . | 60 | . | . | . | . | . | . | . | . | . | |
|
|
|
|
70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|  | . | . | . |  |  |  |  |  |  |  |  |  |  |  |
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |
|
|  |  |  |  |  |
|
|
|
|
|  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | I | S | V | G | N | L | T | F | S | L | P | S | E | T | D | F | V | S | K | R | V | V | N | N | N | K | S | A | R | . |
. |
. |
I | Y | R | I | A | I | S | A | I | D | S | P | G | . |
. |
. |
. |
. |
S | S | E | L | R | T | R | P | V | D | G | E | L | L | F | A | P | R | Q | L | A | L | Q | A | G | E | S | E | Y |
Query Conservation |   |
|
|   |
|   |
|   |   |
|   |   |   |   |   |   |   |   |   |
|
|   |
|   |
|   |   |   |   |   |   | . | . | . |   |
|
|
|   |
|   |   |   |   |   |   |   | . | . | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |
|   |
|
|   |   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |
|   |   |
|   |
|   |
|
|
|
|   |
|   |   |   |   |   |
|
|
|   |   |
|   |
|
|   |
|
|
|
|   |
|
|   |
|
|
|
|
|   |   |
|   |   |   |   |   |   |   |
|   |   |
|   |
|   |   |
|
|   |
|   |   |   |   |
| . |
|   |
|
|
|
|
|
|
Template Sequence |   |
S | V | K | V | E | D | A | T | Y | R | V | P | G | R | A | M | R | M | K | L | T | I | T | N | H | G | N | S | P | I | R | L | G | E | F | Y | T | A | S | V | R | F | L | D | S | D | V | Y | K | D | T | T | G | Y | P | E | D | L | L | A | E | D | G | L | S | V | S | D | N | S | P | . |
L | A | P | G | E | T | R | T |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  | S | S |
| S |  |  |  |  |  |  |  |  |  |  |
| S | S | S |
|  |  |  |  |  |  |  |
| S | S |
|  |  |  |
| T | T | T |
|
|
|
| S |
|
|
| T | T | T |  |  | T | T |
|  |  |  | S |
|
| S |
| . | B |
| T | T |
|  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |
|
|  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|  |  |  |
|
|
|
|
| . |
|
|
|
|
|  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
283 | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | |
. | . | . | . | . | . | 360 | . |
  |
  |   |
99 | 100 | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
Query Sequence |   |
F | K | F | Y | Y | H | G | P |
Query Conservation |   |
|
|
|   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|   |
|   |
|
|
Template Sequence |   |
V | D | V | T | A | S | D | A |
Template Known Secondary structure |   |
 |  |  |  |  |  |
| T |
Template Predicted Secondary structure |   |
 |  |  |  |  |
|
|  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
  |   |
362 | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|