Job Description P77263 Confidence 10.15% Date Thu Jan 5 12:26:58 GMT 2012 Rank 95 Aligned Residues 86 % Identity 13% Template c3qnfA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:endoplasmic reticulum aminopeptidase 1; PDBTitle: crystal structure of the open state of human endoplasmic reticulum2 aminopeptidase 1 erap1 Resolution 3.00 Å

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		31	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.		.	.	.
Predicted Secondary structure																																																																														.
Query SS confidence																																																																														.
Query Sequence		G	N	L	T	F	S	L	P	S	E	T	D	F	V	S	K	R	V	V	N	N	N	K	S	A	R	I	Y	R	I	A	I	S	A	I	D	S	P	G	S	S	E	L	R	T	R	P	V	D	G	E	L	L	F	A	P	R	Q	L	A	L	Q	A	G	E	S	E	Y	F	K	F	Y	Y	H	G	P	.	R	D	N
Query Conservation																																																																														.
Alig confidence																					.	.																																						.																		.
Template Conservation																					.	.																																						.
Template Sequence		G	T	T	K	V	E	I	T	A	S	Q	P	T	S	T	I	I	L	H	.	.	S	H	H	L	Q	I	S	R	A	T	L	R	K	G	L	S	E	E	P	L	Q	V	L	E	H	P	R	Q	E	Q	I	A	L	L	A	P	E	.	P	L	L	V	G	L	P	Y	T	V	V	I	H	Y	A	G	N	L	S	E	T
Template Known Secondary structure											S	S									.	.			S																							G	G	G	T									.				B	T														B	S	S
Template Predicted Secondary structure																					.	.																																						.
Template SS confidence
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.			.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.		.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
		110	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	E	R	Y	Y	R	V	S	F	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	H	G	F	Y	K	S	T	Y	R
Template Known Secondary structure		S	S
Template Predicted Secondary structure
Template SS confidence
		159	160	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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