Return to main results Retrieve Phyre Job Id

Job DescriptionP77263
Confidence96.07%DateThu Jan 5 12:26:58 GMT 2012
Rank18Aligned Residues88
% Identity10%Templatec3o0lB_
PDB info PDB header:structural genomics, unknown functionChain: B: PDB Molecule:uncharacterized protein; PDBTitle: crystal structure of a pfam duf1425 family member (shew_1734) from2 shewanella sp. pv-4 at 1.81 a resolution
Resolution1.81 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   22.......30.........40.........50.........60.........70.........80...... ...90.........100
Predicted Secondary structure 


























.




Query SS confidence 
































































.













Query Sequence  APLTQAISVGNLTFSLPSETDFVSKRVVNNNKSARIYRIAISAIDSPGSSELRTRPVDGELLFAP. RQLALQAGESEYFK
Query Conservation     



 
 
  
         

 
 
       


 
                   
   
.    
 

  
 

Alig confidence 






















































........

.













Template Conservation 
 
   
 
         


   
 
 
       
 


 


  
  
    ........  
    
 
     
 
Template Sequence  GSFHSDVDVSAVTTQAEAGFLRARGTIISKSPKDQRLQYKFTWYDINGATVEDEG. . . . . . . . VSWKSLKLHGKQQXQVT
Template Known Secondary structure  TT


TT
SSS

TTS


TT........



TT
Template Predicted Secondary structure 


















........





Template SS confidence 















































































   37..40.........50.........60.........70.........80.........90. ........100........
 
   101........110.........120
Predicted Secondary structure 







Query SS confidence 



















Query Sequence  FYYHGPRDNRERYYRVSFRE
Query Conservation 
         
  


    
Alig confidence 

...














Template Conservation    ...

 
 
  






Template Sequence  AL. . . SPNATAVRCELYVRE
Template Known Secondary structure  ...
SSTT


Template Predicted Secondary structure  ...





Template SS confidence 



















   109110 .........120.....
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions