Job Description P77263 Confidence 9.42% Date Thu Jan 5 12:26:58 GMT 2012 Rank 97 Aligned Residues 87 % Identity 15% Template c2zv4O_ PDB info PDB header:structural protein Chain: O: PDB Molecule:major vault protein; PDBTitle: the structure of rat liver vault at 3.5 angstrom resolution Resolution 3.50 Å

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		28	.	30	.	.	.	.	.	.	.	.	.	40	.	.			.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.
Predicted Secondary structure																	.	.
Query SS confidence																	.	.
Query Sequence		I	S	V	G	N	L	T	F	S	L	P	S	E	T	D	.	.	F	V	S	K	R	V	V	N	N	N	K	S	A	R	I	Y	R	I	A	I	S	A	I	D	S	P	G	S	S	E	L	R	T	R	P	V	D	G	E	L	L	F	A	P	R	Q	L	A	L	Q	A	G	E	S	E	Y	F	K	F	Y	Y	H	G
Query Conservation																	.	.
Alig confidence																	.	.
Template Conservation
Template Sequence		V	V	K	G	E	K	S	F	F	L	Q	P	G	E	R	L	E	R	G	I	Q	D	V	Y	V	L	S	E	Q	Q	G	L	L	L	K	A	L	Q	P	L	E	E	G	E	S	E	E	K	V	S	H	Q	A	G	D	C	W	L	I	R	G	P	L	E	Y	V	P	S	A	K	V	E	V	V	E	E	R	Q	A	I
Template Known Secondary structure					S	S							T	T				S	S	T	T		B																S	S		B	S	S		S	T	T				B		T	T								S							T	T										B
Template Predicted Secondary structure
Template SS confidence
		301	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380
		106	.	.	.	110	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	R	D	N	R	E	R	Y	Y
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	L	D	Q	N	E	G	I	Y
Template Known Secondary structure					T	T
Template Predicted Secondary structure
Template SS confidence
		381	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions