Job Description P77263 Confidence 97.94% Date Thu Jan 5 12:26:58 GMT 2012 Rank 13 Aligned Residues 166 % Identity 17% Template c2qsvA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein; PDBTitle: crystal structure of protein of unknown function from porphyromonas2 gingivalis w83 Resolution 2.10 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		26	.	.	.	30	.	.	.	.	.	.	.	.					.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.
Predicted Secondary structure															.	.	.	.
Query SS confidence															.	.	.	.
Query Sequence		Q	A	I	S	V	G	N	L	T	F	S	L	P	.	.	.	.	S	E	T	D	F	V	S	K	R	V	V	N	N	N	K	S	A	R	I	Y	R	I	A	I	S	A	I	D	S	P	G	S	S	E	L	R	T	R	P	V	D	G	E	L	L	F	A	P	R	Q	L	A	L	Q	A	G	E	S	E	Y	F	K	F
Query Conservation															.	.	.	.
Alig confidence															.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	P	L	Q	V	S	N	A	R	L	L	F	P	I	S	X	P	E	D	E	G	V	V	R	L	V	V	N	N	T	D	E	S	D	L	Q	V	A	V	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	L	P	S	F	V	S	L	D	D	R	A	F	R	L	Q	A	R	E	P	R	E	L	N	L
Template Known Secondary structure							S		S						S	B		T	T													S	S	S								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				T	T				S								S	S	S
Template Predicted Secondary structure																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40																.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.
		102	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.											.	.	.	170	.
Predicted Secondary structure																																																																			.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																			.	.	.	.	.	.	.	.	.	.
Query Sequence		Y	Y	H	G	P	R	D	N	R	E	R	Y	Y	R	V	S	F	R	E	V	P	T	R	N	H	T	R	R	S	P	T	G	G	V	V	S	T	E	P	V	V	V	M	D	T	I	L	V	V	R	P	R	Q	V	Q	F	K	W	S	F	D	K	V	T	G	.	.	.	.	.	.	.	.	.	.	T	V	S	N	T
Query Conservation																																																																			.	.	.	.	.	.	.	.	.	.
Alig confidence																																																																			.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	L	A	V	P	R	N	X	P	P	G	X	K	D	E	P	L	V	L	E	V	T	S	P	E	T	G	K	K	A	V	D	S	V	X	V	S	L	P	L	V	D	N	F	P	A	L	T	A	A	Q	T	G	V	X	E	L	S	T	Y	L	D	X	G	Q	L	D	G	E	T	T	K	A	A	I	E	I	R	N	V
Template Known Secondary structure							T	T			S														T	T	T																		G	G	G			G	G	G																T	T	S
Template Predicted Secondary structure
Template SS confidence
		66	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
		172	.	.	.	.	.	.	.		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.
Predicted Secondary structure										.
Query SS confidence										.
Query Sequence		G	N	T	W	F	K	L	L	.	I	K	P	G	C	D	S	T	E	E	E	G	D	A	W	Y	L	R	P	G	D	V	V	H	Q	P	E
Query Conservation										.
Alig confidence										.
Template Conservation
Template Sequence		G	A	G	P	L	R	L	H	S	V	T	T	R	N	P	A	L	T	A	V	P	D	R	T	E	I	K	P	G	G	S	T	L	L	R	I
Template Known Secondary structure		S	S	S											S	T	T						S		S				T	T
Template Predicted Secondary structure
Template SS confidence
		146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions