Job Description P77263 Confidence 99.97% Date Thu Jan 5 12:26:58 GMT 2012 Rank 3 Aligned Residues 172 % Identity 17% Template c2co7B_ PDB info PDB header:fibril protein Chain: B: PDB Molecule:putative fimbriae assembly chaperone; PDBTitle: salmonella enterica safa pilin in complex with the safb2 chaperone (type ii) Resolution 1.8 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		22	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	P	L	T	Q	A	I	S	V	G	N	L	T	F	S	L	P	S	E	T	D	F	V	S	K	R	V	V	N	N	N	K	S	A	R	I	Y	R	I	A	I	S	A	I	D	S	P	G	S	S	E	L	R	T	R	P	V	D	G	E	L	L	F	A	P	R	Q	L	A	L	Q	A	G	E	S	E	Y	F	K	F
Query Conservation
Alig confidence																																																		.	.	.	.	.	.	.	.	.
Template Conservation																																																		.	.	.	.	.	.	.	.	.
Template Sequence		A	T	K	L	F	S	V	K	L	G	A	T	R	V	I	Y	H	A	G	T	A	G	A	T	L	S	V	S	N	P	Q	N	Y	P	I	L	V	Q	S	S	V	K	A	A	D	K	S	S	.	.	.	.	.	.	.	.	.	P	A	P	F	L	V	M	P	P	L	F	R	L	E	A	N	Q	Q	S	Q	L	R	I
Template Known Secondary structure											S		S						T	T	S	S										S	S	S											T	T	S	S	S	.	.	.	.	.	.	.	.	.	B		S					S	S						T	T
Template Predicted Secondary structure																																																		.	.	.	.	.	.	.	.	.
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.										.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
		102	.	.	.	.			.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.										.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
Predicted Secondary structure							.	.																																																		.	.	.	.	.	.	.	.	.
Query SS confidence							.	.																																																		.	.	.	.	.	.	.	.	.
Query Sequence		Y	Y	H	G	P	.	.	R	D	N	R	E	R	Y	Y	R	V	S	F	R	E	V	P	T	R	N	H	T	R	R	S	P	T	G	G	V	V	S	T	E	P	V	V	V	M	D	T	I	L	V	V	R	P	R	Q	V	.	.	.	.	.	.	.	.	.	Q	F	K	W	S	F	D	K	V	T	G	T	V	S	N
Query Conservation							.	.																																																		.	.	.	.	.	.	.	.	.
Alig confidence							.	.																						.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.
Template Conservation																														.	.	.	.	.	.	.	.	.	.
Template Sequence		V	R	T	G	G	D	M	P	T	D	R	E	T	L	Q	W	V	C	I	K	A	V	P	P	E	T	L	D	.	.	.	.	.	.	.	.	.	.	L	N	L	S	I	N	A	C	D	K	L	I	F	R	P	D	A	V	K	G	T	P	E	D	V	A	G	N	L	R	W	V	E	T	G	N	K	L	K	V	E	N
Template Known Secondary structure										S	S	S																		.	.	.	.	.	.	.	.	.	.																T	T	S		S						G	G	G							T	T
Template Predicted Secondary structure																														.	.	.	.	.	.	.	.	.	.
Template SS confidence
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.											.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.
		171	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.						.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.
Predicted Secondary structure																							.	.	.	.	.
Query SS confidence																							.	.	.	.	.
Query Sequence		T	G	N	T	W	F	K	L	L	I	K	P	G	C	D	S	T	E	E	E	G	.	.	.	.	.	D	A	W	Y	L	R	P	G	D	V	V	H	Q	P	E	L	R	Q	P	G	N
Query Conservation																							.	.	.	.	.
Alig confidence																							.	.	.	.	.
Template Conservation
Template Sequence		P	T	P	F	Y	M	N	L	A	S	V	T	V	G	G	K	P	I	T	G	L	E	Y	V	P	P	F	A	D	K	T	L	N	H	G	D	I	E	W	R	V	I	T	D	F	G	G
Template Known Secondary structure			S	S	S		B								T	T									B		T	T															B		T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions