Job Description P77263 Confidence 99.97% Date Thu Jan 5 12:26:58 GMT 2012 Rank 2 Aligned Residues 163 % Identity 15% Template c1z9sA_ PDB info PDB header:chaperone/immune system Chain: A: PDB Molecule:chaperone protein caf1m; PDBTitle: crystal structure of the native chaperone:subunit:subunit2 caf1m:caf1:caf1 complex Resolution 2.20 Å

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		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	L	T	Q	A	I	S	V	G	N	L	T	F	S	L	P	S	E	T	D	F	V	S	K	R	V	V	N	N	N	K	S	A	R	I	Y	R	I	A	I	S	A	I	D	S	P	G	S	S	E	L	R	T	R	P	V	D	G	E	L	L	F	A	P	R	Q	L	A	L	Q	A	G	E	S	E	Y	F	K	F	Y
Query Conservation
Alig confidence																																								.	.	.	.										.	.	.	.	.	.	.
Template Conservation																																								.	.	.	.										.	.	.	.	.	.	.
Template Sequence		S	K	E	Y	G	V	T	I	G	E	S	R	I	I	Y	P	L	D	A	A	G	V	M	V	S	V	K	N	T	Q	D	Y	P	V	L	I	Q	S	.	.	.	.	R	I	Y	D	E	N	K	E	K	.	.	.	.	.	.	.	P	F	V	V	T	P	P	L	F	R	L	D	A	K	Q	Q	N	S	L	R	I	A
Template Known Secondary structure										S	S	S						T	T		S										S	S	S							.	.	.	.					T	T	S			.	.	.	.	.	.	.						S	S						T	T
Template Predicted Secondary structure																																								.	.	.	.										.	.	.	.	.	.	.
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.					.	.	.	50	.	.	.	.	.								.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
		103	.	.	.			.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.										.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.
Predicted Secondary structure						.	.																																																		.	.	.	.	.	.	.	.	.
Query SS confidence						.	.																																																		.	.	.	.	.	.	.	.	.
Query Sequence		Y	H	G	P	.	.	R	D	N	R	E	R	Y	Y	R	V	S	F	R	E	V	P	T	R	N	H	T	R	R	S	P	T	G	G	V	V	S	T	E	P	V	V	V	M	D	T	I	L	V	V	R	P	R	Q	V	.	.	.	.	.	.	.	.	.	Q	F	K	W	S	F	D	K	V	T	G	T	V	S	N	T
Query Conservation						.	.																																																		.	.	.	.	.	.	.	.	.
Alig confidence						.	.																			.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.
Template Conservation																										.	.	.	.	.	.	.	.	.
Template Sequence		Q	A	G	G	V	F	P	R	D	K	E	S	L	K	W	L	C	V	K	G	I	P	P	D	.	.	.	.	.	.	.	.	.	V	G	V	F	V	Q	F	A	I	N	N	C	I	K	L	L	V	R	P	N	E	L	K	G	T	P	I	Q	F	A	E	N	L	S	W	K	V	D	G	G	K	L	I	A	E	N	P
Template Known Secondary structure				S					S	S	S															.	.	.	.	.	.	.	.	.																				T	T	S		S		G	G	G	T	G	G	G							T	T
Template Predicted Secondary structure																										.	.	.	.	.	.	.	.	.
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.										.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	N	T	W	F	K	L	L	I	K	P	G	C	D	S	T	E	E	E	G	D	A	W	Y	L	R	P	G	D	V	V	H	Q	P	E	L	R
Query Conservation
Alig confidence																						.	.	.
Template Conservation																						.	.	.
Template Sequence		S	P	F	Y	M	N	I	G	E	L	T	F	G	G	K	S	I	P	S	H	.	.	.	Y	I	P	P	K	S	T	W	A	F	D	L	A	R
Template Known Secondary structure		S	S	S										T	T							.	.	.				T	T
Template Predicted Secondary structure																						.	.	.
Template SS confidence
		173	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.				.	.	.	.	.	.	.	200	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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