Job Description P24232 Confidence 99.87% Date Thu Jan 5 11:41:28 GMT 2012 Rank 68 Aligned Residues 124 % Identity 14% Template c3mkbD_ PDB info PDB header:oxygen storage, oxygen transport Chain: D: PDB Molecule:hemoglobin subunit beta; PDBTitle: crystal structure determination of shortfin mako (isurus oxyrinchus)2 hemoglobin at 1.9 angstrom resolution Resolution 1.90 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	D	A	Q	T	I	A	T	V	K	A	T	I	P	L	L	V	E	T	G	P	K	L	T	A	H	F	Y	D	R	M	F	T	H	N	P	E	L	K	E	I	F	N	M	S	N	Q	R	N	G	D	Q	R	E	A	L	F	N	A	I	A	A	Y	A	S	N	I	E	N	L	P	A	L	L	P	A	V	E	K	I
Query Conservation
Alig confidence																		.	.																											.	.	.	.
Template Conservation																		.	.																											.	.	.	.
Template Sequence		W	T	Q	E	E	R	D	E	I	V	K	T	F	F	S	A	.	.	N	S	S	A	I	G	T	K	A	L	E	R	M	F	V	V	F	P	W	T	N	A	Y	F	F	S	.	.	.	.	A	S	I	H	A	A	I	V	V	G	A	L	Q	D	A	V	K	H	E	D	D	V	K	A	E	F	V	N	I	S	K	A
Template Known Secondary structure															T	T	S	.	.																	S	G	G	G	G	T	T				.	.	.	.																		T	T	T
Template Predicted Secondary structure																		.	.																											.	.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.			.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.					.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.			.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.
Predicted Secondary structure																																	.	.
Query SS confidence																																	.	.
Query Sequence		A	Q	K	H	T	S	F	Q	I	K	P	E	Q	Y	N	I	V	G	E	H	L	L	A	T	L	D	E	M	F	S	P	.	.	G	Q	E	V	L	D	A	W	G	K	A	Y	G	V	L	A	N	V	F	I	N
Query Conservation																																	.	.
Alig confidence						.	.																										.	.
Template Conservation						.	.
Template Sequence		H	A	D	K	.	.	L	H	I	D	P	G	S	F	H	L	L	T	D	S	F	I	V	E	L	A	H	L	K	K	V	A	F	T	P	F	V	F	A	V	W	I	K	F	F	Q	V	V	I	D	A	I	S	S
Template Known Secondary structure					T	.	.	S				G	G	G																	G	G	G																					T	T
Template Predicted Secondary structure						.	.
Template SS confidence
		82	.	.	.			.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions