Job Description P24232 Confidence 70.36% Date Thu Jan 5 11:41:28 GMT 2012 Rank 202 Aligned Residues 130 % Identity 10% Template c2vmlD_ PDB info PDB header:photosynthesis Chain: D: PDB Molecule:phycocyanin beta chain; PDBTitle: the monoclinic structure of phycocyanin from gloeobacter2 violaceus Resolution 2.40 Å

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		1	.	.	.	.	.	.	.	.	10	.											.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40						.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.
Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.																														.	.	.	.	.
Query SS confidence													.	.	.	.	.	.	.	.	.	.																														.	.	.	.	.
Query Sequence		M	L	D	A	Q	T	I	A	T	V	K	.	.	.	.	.	.	.	.	.	.	A	T	I	P	L	L	V	E	T	G	P	K	L	T	A	H	F	Y	D	R	M	F	T	H	N	P	E	L	K	.	.	.	.	.	E	I	F	N	M	S	N	Q	R	N	G	D	Q	R	E	A	L	F	N	A	I	A	A	Y	A
Query Conservation													.	.	.	.	.	.	.	.	.	.																														.	.	.	.	.
Alig confidence													.	.	.	.	.	.	.	.	.	.																														.	.	.	.	.
Template Conservation
Template Sequence		F	L	S	E	Q	E	L	N	Q	L	T	N	L	V	K	E	S	N	K	R	L	D	A	V	N	A	I	T	G	N	A	A	E	I	I	S	D	A	A	H	K	L	F	A	E	Q	T	D	L	I	R	P	G	G	N	A	Y	P	N	R	R	M	A	A	C	L	R	D	M	E	I	I	L	R	Y	V	S	Y	A	L
Template Known Secondary structure																	T													T	T																	G	G	G	G	S	T	T	S	T	T		S
Template Predicted Secondary structure
Template SS confidence
		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.
		66	.	.	.	70	.	.	.	.		.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.									.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.
Predicted Secondary structure											.																																								.	.	.	.	.	.	.	.
Query SS confidence											.																																								.	.	.	.	.	.	.	.
Query Sequence		S	N	I	E	N	L	P	A	L	.	L	P	A	V	E	K	I	A	Q	K	H	T	S	F	Q	I	K	P	E	Q	Y	N	I	V	G	E	H	L	L	A	T	L	D	E	M	F	S	P	G	.	.	.	.	.	.	.	.	Q	E	V	L	D	A	W	G	K	A	Y	G	V	L	A	N	V	F
Query Conservation											.																																								.	.	.	.	.	.	.	.
Alig confidence			.								.																																								.	.	.	.	.	.	.	.
Template Conservation			.
Template Sequence		L	.	A	G	D	A	S	V	L	E	D	R	C	L	N	G	L	K	E	T	Y	V	A	L	G	T	P	T	R	S	V	A	R	A	V	Q	L	M	K	E	T	A	I	G	Y	V	N	S	P	S	G	V	T	R	G	D	C	S	A	L	V	N	E	A	A	T	Y	F	D	K	A	A	A	S	I
Template Known Secondary structure			.		T	S	S							T	T	T	T									T																							S		S	S
Template Predicted Secondary structure			.
Template SS confidence
		98		.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions