Job Description P24232 Confidence 67.87% Date Thu Jan 5 11:41:28 GMT 2012 Rank 207 Aligned Residues 129 % Identity 10% Template c2vmlA_ PDB info PDB header:photosynthesis Chain: A: PDB Molecule:phycocyanin alpha chain; PDBTitle: the monoclinic structure of phycocyanin from gloeobacter2 violaceus Resolution 2.40 Å

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		1	.	.	.	.	.	.	.	.	10	.											.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.		.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.
Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.																												.																														.	.
Query SS confidence													.	.	.	.	.	.	.	.	.	.																												.																														.	.
Query Sequence		M	L	D	A	Q	T	I	A	T	V	K	.	.	.	.	.	.	.	.	.	.	A	T	I	P	L	L	V	E	T	G	P	K	L	T	A	H	F	Y	D	R	M	F	T	H	N	P	E	.	L	K	E	I	F	N	M	S	N	Q	R	N	G	D	Q	R	E	A	L	F	N	A	I	A	A	Y	A	S	N	.	.
Query Conservation													.	.	.	.	.	.	.	.	.	.																												.																														.	.
Alig confidence													.	.	.	.	.	.	.	.	.	.																												.																														.	.
Template Conservation
Template Sequence		F	L	N	N	T	E	L	Q	A	A	N	G	R	F	Q	R	A	T	A	S	M	E	A	A	R	A	L	T	S	N	A	D	S	L	V	K	G	A	V	Q	E	V	Y	N	K	F	P	Y	L	T	Q	P	G	Q	M	G	Y	G	D	T	N	Q	A	K	C	A	R	D	I	S	H	Y	L	R	F	I	T	Y	S	L
Template Known Secondary structure																															T																S	G	G	G	G	S	T	T	S	T	T		S
Template Predicted Secondary structure
Template SS confidence
		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.
			68	.	70	.	.	.	.		.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.
Predicted Secondary structure		.								.
Query SS confidence		.								.
Query Sequence		.	I	E	N	L	P	A	L	.	L	P	A	V	E	K	I	A	Q	K	H	T	S	F	Q	I	K	P	E	Q	Y	N	I	V	G	E	H	L	L	A	T	L	D	E	M	F	S	P	G	Q	E	V	L	D	A	W	G	K	A	Y	G	V	L	A	N	V	F
Query Conservation		.								.
Alig confidence		.								.																																					.	.
Template Conservation																																															.	.
Template Sequence		V	A	G	G	T	G	P	L	D	D	Y	I	V	A	G	L	R	E	V	N	R	T	F	N	L	S	P	S	W	Y	I	E	A	L	K	H	I	K	G	K	V	G	S	Q	L	.	.	S	G	Q	P	L	T	E	A	N	A	Y	I	D	Y	C	I	N	A	L
Template Known Secondary structure				T	S	S							T	T	T	T								T	T																						.	.																			T
Template Predicted Secondary structure																																															.	.
Template SS confidence
		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.			.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions