Job Description P24232 Confidence 98.07% Date Thu Jan 5 11:41:28 GMT 2012 Rank 180 Aligned Residues 139 % Identity 12% Template c2veeC_ PDB info PDB header:transport protein Chain: C: PDB Molecule:protoglobin; PDBTitle: structure of protoglobin from methanosarcina acetivorans2 c2a Resolution 2.60 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.							.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.
Predicted Secondary structure																																																		.	.	.	.	.	.
Query SS confidence																																																		.	.	.	.	.	.
Query Sequence		M	L	D	A	Q	T	I	A	T	V	K	A	T	I	P	L	L	V	E	T	G	P	K	L	T	A	H	F	Y	D	R	M	F	T	H	N	P	E	L	K	E	I	F	N	M	S	N	Q	.	.	.	.	.	.	R	N	G	D	Q	R	E	A	L	F	N	A	I	A	A	Y	A	S	N	I	E	N	L	P	A	L
Query Conservation																																																		.	.	.	.	.	.
Alig confidence																																				.														.	.	.	.	.	.																							.	.
Template Conservation																																				.																																										.	.
Template Sequence		M	F	T	A	E	D	E	E	Y	I	Q	K	A	G	E	V	L	E	D	Q	V	E	E	I	L	D	T	W	Y	G	F	V	G	S	.	H	P	H	L	L	Y	Y	F	T	S	P	D	G	T	P	N	E	K	Y	L	A	A	V	R	K	R	F	S	R	W	I	L	D	T	S	N	R	S	Y	D	Q	.	.	A	W
Template Known Secondary structure		T																																	T	.						G	G	G	B		T	T	S	S	B																						S			S		.	.
Template Predicted Secondary structure																																				.																																										.	.
Template SS confidence
		33	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.		.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.			.	.
		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.													.	.	.	.	.	.	100	.	.	.	.	.	.	.				.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																					.	.	.	.	.	.	.	.	.	.	.	.															.	.	.
Query SS confidence																					.	.	.	.	.	.	.	.	.	.	.	.															.	.	.
Query Sequence		L	P	A	V	E	K	I	A	Q	K	H	T	S	F	Q	I	K	P	E	.	.	.	.	.	.	.	.	.	.	.	.	Q	Y	N	I	V	G	E	H	L	L	A	T	L	D	.	.	.	E	M	F	S	P	G	Q	E	V	L	D	A	W	G	K	A	Y	G	V	L	A	N	V	F	I	N	R	E	A	E	I	Y
Query Conservation																					.	.	.	.	.	.	.	.	.	.	.	.															.	.	.
Alig confidence																					.	.	.	.	.	.	.	.	.	.	.	.															.	.	.
Template Conservation
Template Sequence		L	D	Y	Q	Y	E	I	G	L	R	H	H	R	T	K	K	N	Q	T	D	N	V	E	S	V	P	N	I	G	Y	R	Y	L	V	A	F	I	Y	P	I	T	A	T	M	K	P	F	L	A	R	K	G	H	T	P	E	E	V	E	K	M	Y	Q	A	W	F	K	A	T	T	L	Q	V	A	L	W	S	Y	P	Y
Template Known Secondary structure													S	T	T	T	T	T	T	T	T	T					S										T							T	T							T																										T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.
		140	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	E	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	K	Y
Template Known Secondary structure		S		T
Template Predicted Secondary structure
Template SS confidence
		190	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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