Job Description P24232 Confidence 100.00% Date Thu Jan 5 11:41:28 GMT 2012 Rank 19 Aligned Residues 234 % Identity 21% Template c2rc5D_ PDB info PDB header:oxidoreductase Chain: D: PDB Molecule:ferredoxin-nadp reductase; PDBTitle: refined structure of fnr from leptospira interrogans Resolution 2.43 Å

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		154	.	.	.	.	.	160	.	.	.	.	.	.															.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.										.	.	200	.	.	.	.	.	.	.	.	.	210
Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.	.	.	.	.																																.	.	.	.	.	.	.	.	.
Query SS confidence															.	.	.	.	.	.	.	.	.	.	.	.	.	.																																.	.	.	.	.	.	.	.	.
Query Sequence		D	F	R	I	V	A	K	T	P	R	S	A	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	T	S	F	E	L	E	P	V	D	G	G	A	V	A	E	Y	R	P	G	Q	Y	L	G	V	W	L	K	P	E	G	.	.	.	.	.	.	.	.	.	F	P	H	Q	E	I	R	Q	Y	S	L	T	R
Query Conservation															.	.	.	.	.	.	.	.	.	.	.	.	.	.																																.	.	.	.	.	.	.	.	.
Alig confidence															.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.																					.	.	.	.	.	.	.	.	.
Template Conservation																																						.	.
Template Sequence		K	A	K	V	I	S	N	V	L	L	T	P	E	T	G	T	G	K	R	P	K	K	E	G	E	A	L	V	H	R	I	V	L	A	I	D	.	.	H	S	A	Y	P	Y	V	I	G	Q	S	G	G	V	I	P	P	G	E	D	P	E	K	K	A	K	G	L	A	D	V	G	Y	T	V	R	L	Y	S	I	A	S
Template Known Secondary structure												S			T	T	S	S	S	S		T	T	S														.	.	T	T	T					T	T								S	S	B								T		S			B								B		S
Template Predicted Secondary structure																																						.	.
Template SS confidence
		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.			.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100
		211	.					.	.	.	.	.	.	.	220	.	.	.	.											.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.			.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.
Predicted Secondary structure				.	.	.	.													.	.	.	.	.	.	.	.	.	.																															.	.
Query SS confidence				.	.	.	.													.	.	.	.	.	.	.	.	.	.																															.	.
Query Sequence		K	P	.	.	.	.	D	G	K	G	Y	R	I	A	V	K	R	E	.	.	.	.	.	.	.	.	.	.	E	G	G	Q	V	S	N	W	L	H	N	H	A	N	V	G	D	V	V	K	L	V	A	P	A	G	D	F	F	M	.	.	A	V	A	D	D	T	P	V	T	L	I	S	A	G	V	G	Q	T	P	M
Query Conservation				.	.	.	.													.	.	.	.	.	.	.	.	.	.																															.	.
Alig confidence				.	.	.	.													.	.	.	.	.	.	.	.	.	.										.																					.	.
Template Conservation																																							.
Template Sequence		P	S	Y	F	G	M	K	E	D	N	I	E	F	I	I	K	R	D	N	I	Y	D	E	N	G	N	I	Q	F	K	G	V	C	S	N	Y	M	.	C	D	L	K	P	G	D	E	V	T	M	T	G	P	S	G	K	K	F	L	L	P	N	T	D	F	S	G	D	I	M	F	L	A	T	G	T	G	I	A	P	F
Template Known Secondary structure								S	S											B			B	T	T	T	B		S		B								.		T			T	T											S	S	S				S	S		B		S								G	G	G	G
Template Predicted Secondary structure																																							.
Template SS confidence
		101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.		.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.
		275	.	.	.	.	280	.	.	.	.				.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.		.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Predicted Secondary structure												.	.	.																																													.
Query SS confidence												.	.	.																																													.
Query Sequence		L	A	M	L	D	T	L	A	K	A	.	.	.	G	H	T	A	Q	V	N	W	F	H	A	A	E	N	G	D	V	H	A	F	A	D	E	V	K	E	L	G	Q	S	L	P	R	F	T	A	H	T	W	Y	R	Q	P	S	.	E	A	D	R	A	K	G	Q	F	D	S	E	G	L	M	D	L	S	K	L	E	G
Query Conservation												.	.	.																																													.
Alig confidence												.	.	.																																													.
Template Conservation
Template Sequence		I	G	M	S	E	E	L	L	E	H	K	L	I	K	F	T	G	N	I	T	L	V	Y	G	A	P	Y	S	D	E	L	V	M	M	D	Y	L	K	G	L	E	S	K	H	K	N	F	K	L	I	T	A	I	S	R	E	E	K	N	S	F	D	G	G	R	M	Y	I	S	H	R	V	R	E	Q	A	E	A	V	K
Template Known Secondary structure										T	T		S	S		B		S									S	S	G	G	G			S												S	S								T	T	T		B		T	T	T	S	S	B										T
Template Predicted Secondary structure
Template SS confidence
		181	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260
		351	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.						.	370	.	.	.	.	.	.	.	.	.	380	.	.	.										.	.	.	.	.	.	390
Predicted Secondary structure																				.	.	.	.	.																.	.	.	.	.	.	.	.	.
Query SS confidence																				.	.	.	.	.																.	.	.	.	.	.	.	.	.
Query Sequence		A	F	S	D	P	T	M	Q	F	Y	L	C	G	P	V	G	F	M	.	.	.	.	.	Q	F	T	A	K	Q	L	V	D	L	G	V	K	Q	E	.	.	.	.	.	.	.	.	.	N	I	H	Y	E	C	F
Query Conservation																				.	.	.	.	.																.	.	.	.	.	.	.	.	.
Alig confidence																				.	.	.	.	.																.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	I	L	N	G	G	G	R	F	Y	I	C	G	G	P	K	G	M	E	K	G	V	I	E	E	I	Q	K	I	S	G	N	T	G	T	Y	E	E	F	K	H	H	L	E	G	A	H	Q	L	F	V	E	T	Y
Template Known Secondary structure						T	T								S	S	T	T	T													T			S												T	T	S
Template Predicted Secondary structure
Template SS confidence
		261	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions