Job Description P24232 Confidence 99.86% Date Thu Jan 5 11:41:28 GMT 2012 Rank 72 Aligned Residues 127 % Identity 13% Template c1yhuW_ PDB info PDB header:oxygen storage/transport Chain: W: PDB Molecule:hemoglobin b1a chain; PDBTitle: crystal structure of riftia pachyptila c1 hemoglobin reveals novel2 assembly of 24 subunits. Resolution 3.15 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.							.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.							.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																		.	.	.	.	.	.																													.	.	.	.	.	.
Query SS confidence																		.	.	.	.	.	.																													.	.	.	.	.	.
Query Sequence		L	D	A	Q	T	I	A	T	V	K	A	T	I	P	L	L	.	.	.	.	.	.	V	E	T	G	P	K	L	T	A	H	F	Y	D	R	M	F	T	H	N	P	E	L	K	E	I	F	N	M	.	.	.	.	.	.	S	N	Q	R	N	G	D	Q	R	E	A	L	F	N	A	I	A	A	Y	A	S	N	I	E
Query Conservation																		.	.	.	.	.	.																													.	.	.	.	.	.
Alig confidence																		.	.	.	.	.	.																													.	.	.	.	.	.
Template Conservation
Template Sequence		C	A	D	A	A	A	A	I	V	Q	A	Q	W	E	D	V	W	S	A	A	A	A	A	A	S	R	V	S	A	G	E	E	V	F	A	A	L	F	K	M	V	P	A	A	K	N	L	F	T	R	V	N	V	A	D	I	N	S	P	E	F	Q	G	H	V	V	R	V	M	G	G	L	D	I	L	I	N	A	L	D
Template Known Secondary structure																				S	S	S																					G	G	G	G	G	G	S	G	G	G	T	G	G	G	T	T	S																				G	G	G
Template Predicted Secondary structure
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.		.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.		.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.
Predicted Secondary structure																					.																									.
Query SS confidence																					.																									.
Query Sequence		N	L	P	A	L	L	P	A	V	E	K	I	A	Q	K	H	T	S	F	.	Q	I	K	P	E	Q	Y	N	I	V	G	E	H	L	L	A	T	L	D	E	M	F	S	P	.	G	Q	E	V	L	D	A	W	G	K	A	Y	G	V	L	A	N	V	F
Query Conservation																					.																									.
Alig confidence																					.																									.				.	.	.
Template Conservation																																																		.	.	.
Template Sequence		D	I	P	T	L	E	S	M	L	D	H	L	A	G	Q	H	A	V	R	D	G	V	T	G	A	G	F	Q	L	M	A	T	V	L	M	E	S	L	P	Q	V	V	E	G	F	N	P	D	.	.	.	A	W	A	S	C	L	A	G	I	A	A	A	I
Template Known Secondary structure																			T	S	T	T			T	T																		S	S					.	.	.
Template Predicted Secondary structure																																																		.	.	.
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.				.	.	.	.	.	.	.	.	140	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions