Job Description P24232 Confidence 99.88% Date Thu Jan 5 11:41:28 GMT 2012 Rank 38 Aligned Residues 130 % Identity 13% Template c1yhuJ_ PDB info PDB header:oxygen storage/transport Chain: J: PDB Molecule:giant hemoglobins b chain; PDBTitle: crystal structure of riftia pachyptila c1 hemoglobin reveals novel2 assembly of 24 subunits. Resolution 3.15 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.				.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.							.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.
Predicted Secondary structure																		.	.	.																													.	.	.	.	.	.
Query SS confidence																		.	.	.																													.	.	.	.	.	.
Query Sequence		L	D	A	Q	T	I	A	T	V	K	A	T	I	P	L	L	.	.	.	V	E	T	G	P	K	L	T	A	H	F	Y	D	R	M	F	T	H	N	P	E	L	K	E	I	F	N	M	.	.	.	.	.	.	S	N	Q	R	N	G	D	Q	R	E	A	L	F	N	A	I	A	A	Y	A	S	N	I	E	N	L	P
Query Conservation																		.	.	.																													.	.	.	.	.	.
Alig confidence																		.	.	.																													.	.	.	.	.	.
Template Conservation
Template Sequence		C	G	P	L	Q	R	L	K	V	K	R	Q	W	A	E	A	Y	G	S	G	N	S	R	E	E	F	G	H	F	I	W	S	H	V	F	Q	H	S	P	A	A	R	D	M	F	K	R	V	R	G	D	N	I	H	T	P	A	F	R	A	H	A	T	R	V	L	G	G	L	D	M	C	I	A	L	L	D	D	E	P
Template Known Secondary structure																		T		S	S	S	T																	G	G	G	G	G	G	G	G	G	G	T	T	T		S	S	S																					T	T
Template Predicted Secondary structure
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	L	L	P	A	V	E	K	I	A	Q	K	H	T	S	F	Q	I	K	P	E	Q	Y	N	I	V	G	E	H	L	L	A	T	L	D	E	M	F	S	P	G	Q	E	V	L	D	A	W	G	K	A	Y	G	V	L	A	N	V	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	L	N	T	Q	L	A	H	L	A	K	Q	H	E	T	R	G	V	E	A	A	H	Y	D	T	V	N	H	A	V	M	M	G	V	E	N	V	I	G	S	E	V	F	D	Q	D	A	W	K	P	C	L	N	V	I	T	N	G	I
Template Known Secondary structure															S	S	S																								S	S	S
Template Predicted Secondary structure
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions