Job Description P24232 Confidence 100.00% Date Thu Jan 5 11:41:28 GMT 2012 Rank 12 Aligned Residues 228 % Identity 20% Template c1umkA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:nadh-cytochrome b5 reductase; PDBTitle: the structure of human erythrocyte nadh-cytochrome b52 reductase Resolution 1.75 Å

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		152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.		.	.	.	.	.	220	.	.	.	.
Predicted Secondary structure																																																																	.											.	.	.	.	.	.
Query SS confidence																																																																	.											.	.	.	.	.	.
Query Sequence		T	R	D	F	R	I	V	A	K	T	P	R	S	A	L	I	T	S	F	E	L	E	P	V	D	G	G	A	V	A	E	Y	R	P	G	Q	Y	L	G	V	W	L	K	P	E	G	F	P	H	Q	E	I	R	Q	Y	S	L	T	R	K	P	D	G	.	K	G	Y	R	I	A	V	K	R	E	.	.	.	.	.	.
Query Conservation																																																																	.											.	.	.	.	.	.
Alig confidence																																																	.	.															.											.	.	.	.	.	.
Template Conservation																																																	.	.
Template Sequence		K	Y	P	L	R	L	I	D	R	E	I	I	S	H	D	T	R	R	F	R	F	A	L	P	S	P	Q	H	I	L	G	L	P	V	G	Q	H	I	Y	L	S	A	R	I	D	G	N	.	.	L	V	V	R	P	Y	T	P	I	S	S	D	D	D	K	G	F	V	D	L	V	I	K	V	Y	F	K	D	T	H	P
Template Known Secondary structure														S	S	S									S	S	T	T		B					T	T										T	T		.	.									S	S		T	T			S											S	S	S	B	T
Template Predicted Secondary structure																																																	.	.
Template SS confidence
		41	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.			.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.
					225	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.																	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.
Predicted Secondary structure		.	.	.																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.
Query SS confidence		.	.	.																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.
Query Sequence		.	.	.	E	G	G	Q	V	S	N	W	L	H	N	H	A	N	V	G	D	V	V	K	L	V	A	P	A	G	D	F	F	M	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	A	D	D	T	P	V	T	L	I	S	A	G	V	G	Q	T	P	M	L	A	M	L	D	T	L	A	K	A	.
Query Conservation		.	.	.																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.
Alig confidence		.	.	.												.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.
Template Conservation																.
Template Sequence		K	F	P	A	G	G	K	M	S	Q	Y	L	E	S	.	M	Q	I	G	D	T	I	E	F	R	G	P	S	G	L	L	V	Y	Q	G	K	G	K	F	A	I	R	P	D	K	K	S	N	P	I	I	R	T	V	K	S	V	G	M	I	A	G	G	T	G	I	T	P	M	L	Q	V	I	R	A	I	M	K	D	P
Template Known Secondary structure		T	B	T	T											.			T	T											S						T	T						S	S	T	T	S								S								G	G	G													T		T
Template Predicted Secondary structure																.
Template SS confidence
		119	120	.	.	.	.	.	.	.	.	.	130	.	.		.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.
		285	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.		.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.			.	.	.	.	.	360	.
Predicted Secondary structure																																			.																																						.	.
Query SS confidence																																			.																																						.	.
Query Sequence		G	H	T	A	Q	V	N	W	F	H	A	A	E	N	G	D	V	H	A	F	A	D	E	V	K	E	L	G	Q	S	L	P	R	.	F	T	A	H	T	W	Y	R	Q	P	S	E	A	D	R	A	K	G	Q	F	D	S	E	G	L	M	D	L	S	K	L	E	G	A	F	S	D	.	.	P	T	M	Q	F	Y	L
Query Conservation																																			.																																						.	.
Alig confidence																																			.														.	.	.	.	.																				.	.
Template Conservation																																																	.	.	.	.	.
Template Sequence		D	D	H	T	V	C	H	L	L	F	A	N	Q	T	E	K	D	I	L	L	R	P	E	L	E	E	L	R	N	K	H	S	A	R	F	K	L	W	Y	T	L	D	R	A	P	E	A	.	.	.	.	.	W	D	Y	G	Q	G	F	V	N	E	E	M	I	R	D	H	L	P	P	P	E	E	E	P	L	V	L	M
Template Known Secondary structure		T												S	S	G	G	G		T	T												T	T	T								S	S			S	S	.	.	.	.	.		S	S			S	S										S			G	G	G
Template Predicted Secondary structure																																																	.	.	.	.	.
Template SS confidence
		198	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.						.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.
		362	.	.	.	.	.	.	.	370		.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.
Predicted Secondary structure											.
Query SS confidence											.
Query Sequence		C	G	P	V	G	F	M	Q	F	.	T	A	K	Q	L	V	D	L	G	V	K	Q	E	N	I	H	Y
Query Conservation											.
Alig confidence											.
Template Conservation
Template Sequence		C	G	P	P	P	M	I	Q	Y	A	C	L	P	N	L	D	H	V	G	H	P	T	E	R	C	F	V
Template Known Secondary structure			S								T	T								T			G	G	G
Template Predicted Secondary structure
Template SS confidence
		273	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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