Job Description P24232 Confidence 99.96% Date Thu Jan 5 11:41:28 GMT 2012 Rank 21 Aligned Residues 216 % Identity 19% Template c1ep3B_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:dihydroorotate dehydrogenase b (pyrk subunit); PDBTitle: crystal structure of lactococcus lactis dihydroorotate dehydrogenase2 b. data collected under cryogenic conditions. Resolution 2.10 Å

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		152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.		.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230
Predicted Secondary structure																																																																	.
Query SS confidence																																																																	.
Query Sequence		T	R	D	F	R	I	V	A	K	T	P	R	S	A	L	I	T	S	F	E	L	E	P	V	D	G	G	A	V	A	E	Y	R	P	G	Q	Y	L	G	V	W	L	K	P	E	G	F	P	H	Q	E	I	R	Q	Y	S	L	T	R	K	P	D	G	.	K	G	Y	R	I	A	V	K	R	E	E	G	G	Q	V	S
Query Conservation																																																																	.
Alig confidence																										.	.																	.	.																				.
Template Conservation																										.	.																	.	.
Template Sequence		Q	E	M	M	T	V	V	S	Q	R	E	V	A	Y	N	I	F	E	M	V	L	K	G	T	.	.	L	V	D	E	M	D	L	P	G	Q	F	L	H	L	A	V	.	.	P	N	G	A	M	L	L	R	R	P	I	S	I	S	S	W	D	K	R	A	K	T	C	T	I	L	Y	R	I	G	D	E	T	T	G	T
Template Known Secondary structure															T	T								S	G	.	.	G	G	G	G			S	T	T								.	.	S		T	T			S											T	T	T	T											T	T	S
Template Predicted Secondary structure																										.	.																	.	.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.			.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.			.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		231	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.			.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.
Predicted Secondary structure																									.	.
Query SS confidence																									.	.
Query Sequence		N	W	L	H	N	H	A	N	V	G	D	V	V	K	L	V	A	P	A	G	D	F	F	.	.	M	A	V	A	D	D	T	P	V	T	L	I	S	A	G	V	G	Q	T	P	M	L	A	M	L	D	T	L	A	K	A	G	H	T	A	Q	V	N	W	F	H	A	A	E	N	G	D	V	H	A	F	A	D	E	V
Query Conservation																									.	.
Alig confidence					.																				.	.																																	.	.
Template Conservation					.																																																						.	.
Template Sequence		Y	K	L	.	S	K	L	E	S	G	A	K	V	D	V	M	G	P	L	G	N	G	F	P	V	A	E	V	T	S	T	D	K	I	L	I	I	G	G	G	I	G	V	P	P	L	Y	E	L	A	K	Q	L	E	K	T	G	.	.	C	Q	M	T	I	L	L	G	F	A	S	E	N	V	K	I	L	E	N	E	F
Template Known Secondary structure					.		T			T	T										S	B					T	T			T	T	S								G	G	G	S														T	.	.										S	S	G	G	G
Template Predicted Secondary structure					.																																																						.	.
Template SS confidence
		81	.	.		.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.			.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
		309	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	E	L	G	Q	S	L	P	R	F	T	A	H	T	W	Y	R	Q	P	S	E	A	D	R	A	K	G	Q	F	D	S	E	G	L	M	D	L	S	K	L	E	G	A	F	S	D	P	T	M	Q	F	Y	L	C	G	P	V	G	F	M	Q	F	T	A	K	Q	L	V	D	L	G	V	K	Q	E	N	I	H	Y	E
Query Conservation
Alig confidence														.	.	.	.	.	.	.	.	.	.	.	.													.	.																																		.	.
Template Conservation														.	.	.	.	.	.	.	.	.	.	.	.													.	.																																		.	.
Template Sequence		S	N	L	K	N	V	T	L	K	I	A	T	.	.	.	.	.	.	.	.	.	.	.	.	D	D	G	S	Y	G	T	K	G	H	V	G	.	.	M	L	M	N	E	I	D	F	E	V	D	A	L	Y	T	C	G	A	P	A	M	L	K	A	V	A	K	K	Y	D	Q	L	E	.	.	R	L	Y	I	S	M	E
Template Known Secondary structure			T	S	T	T								.	.	.	.	.	.	.	.	.	.	.	.	T	T		S	S	S			S				.	.								S			S						S												T	T	T		S	.	.	S
Template Predicted Secondary structure														.	.	.	.	.	.	.	.	.	.	.	.													.	.																																		.	.
Template SS confidence
		158	.	160	.	.	.	.	.	.	.	.	.													170	.	.	.	.	.	.	.	.	.	180	.			.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.			.	.	.	.	.	220	.
		389	390
Predicted Secondary structure
Query SS confidence
Query Sequence		C	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	R
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		222	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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