Job Description P24232 Confidence 100.00% Date Thu Jan 5 11:41:28 GMT 2012 Rank 2 Aligned Residues 392 % Identity 46% Template c1cqxB_ PDB info PDB header:lipid binding protein Chain: B: PDB Molecule:flavohemoprotein; PDBTitle: crystal structure of the flavohemoglobin from alcaligenes eutrophus at2 1.75 a resolution Resolution 1.75 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	L	D	A	Q	T	I	A	T	V	K	A	T	I	P	L	L	V	E	T	G	P	K	L	T	A	H	F	Y	D	R	M	F	T	H	N	P	E	L	K	E	I	F	N	M	S	N	Q	R	N	G	D	Q	R	E	A	L	F	N	A	I	A	A	Y	A	S	N	I	E	N	L	P	A	L	L	P	A	V	E	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		M	L	T	Q	K	T	K	D	I	V	K	A	T	A	P	V	L	A	E	H	G	Y	D	I	I	K	C	F	Y	Q	R	M	F	E	A	H	P	E	L	K	N	V	F	N	M	A	H	Q	E	Q	G	Q	Q	Q	Q	A	L	A	R	A	V	Y	A	Y	A	E	N	I	E	D	P	N	S	L	M	A	V	L	K	N
Template Known Secondary structure																					T																	G	G	G	G	G	T	S			S																						T	T
Template Predicted Secondary structure
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.			.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure																																	.	.
Query SS confidence																																	.	.
Query Sequence		I	A	Q	K	H	T	S	F	Q	I	K	P	E	Q	Y	N	I	V	G	E	H	L	L	A	T	L	D	E	M	F	S	.	.	P	G	Q	E	V	L	D	A	W	G	K	A	Y	G	V	L	A	N	V	F	I	N	R	E	A	E	I	Y	N	E	N	A	S	K	A	G	G	W	E	G	T	R	D	F	R	I	V
Query Conservation																																	.	.
Alig confidence																																	.	.
Template Conservation
Template Sequence		I	A	N	K	H	A	S	L	G	V	K	P	E	Q	Y	P	I	V	G	E	H	L	L	A	A	I	K	E	V	L	G	N	A	A	T	D	D	I	I	S	A	W	A	Q	A	Y	G	N	L	A	D	V	L	M	G	M	E	S	E	L	Y	E	R	S	A	E	Q	P	G	G	W	K	G	W	R	T	F	V	I	R
Template Known Secondary structure										T			G	G	G																	G	G	G																																		S	T	T			S	S
Template Predicted Secondary structure
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.						.	.	230	.	.	.
Predicted Secondary structure																																																																							.	.	.	.	.
Query SS confidence																																																																							.	.	.	.	.
Query Sequence		A	K	T	P	R	S	A	L	I	T	S	F	E	L	E	P	V	D	G	G	A	V	A	E	Y	R	P	G	Q	Y	L	G	V	W	L	K	P	E	G	F	P	H	Q	E	I	R	Q	Y	S	L	T	R	K	P	D	G	K	G	Y	R	I	A	V	K	R	E	E	G	G	.	.	.	.	.	Q	V	S	N	W	L
Query Conservation																																																																							.	.	.	.	.
Alig confidence																																																																							.	.	.	.	.
Template Conservation
Template Sequence		E	K	R	P	E	S	D	V	I	T	S	F	I	L	E	P	A	D	G	G	P	V	V	N	F	E	P	G	Q	Y	T	S	V	A	I	D	V	P	A	L	G	L	Q	Q	I	R	Q	Y	S	L	S	D	M	P	N	G	R	T	Y	R	I	S	V	K	R	E	G	G	G	P	Q	P	P	G	Y	V	S	N	L	L
Template Known Secondary structure							S	S	S									T	T									T	T										T	T	T	T											S				S	S										S		S	S	S
Template Predicted Secondary structure
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
		234	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	N	H	A	N	V	G	D	V	V	K	L	V	A	P	A	G	D	F	F	M	A	V	A	D	D	T	P	V	T	L	I	S	A	G	V	G	Q	T	P	M	L	A	M	L	D	T	L	A	K	A	G	H	T	A	Q	V	N	W	F	H	A	A	E	N	G	D	V	H	A	F	A	D	E	V	K	E	L	G	Q
Query Conservation
Alig confidence																																																								.
Template Conservation																																																								.
Template Sequence		H	D	H	V	N	V	G	D	Q	V	K	L	A	A	P	Y	G	S	F	H	I	D	V	D	A	K	T	P	I	V	L	I	S	G	G	V	G	L	T	P	M	V	S	M	L	K	V	A	L	Q	A	P	P	R	.	Q	V	V	F	V	H	G	A	R	N	S	A	V	H	A	M	R	D	R	L	R	E	A	A	K
Template Known Secondary structure							T	T									B		S		S			T	T			S							S	S														T		S	S			.											T	T	S
Template Predicted Secondary structure																																																								.
Template SS confidence
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.		.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.
		314	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	L	P	R	F	T	A	H	T	W	Y	R	Q	P	S	E	A	D	R	A	K	G	Q	F	D	S	E	G	L	M	D	L	S	K	L	E	G	A	F	S	D	P	T	M	Q	F	Y	L	C	G	P	V	G	F	M	Q	F	T	A	K	Q	L	V	D	L	G	V	K	Q	E	N	I	H	Y	E	C	F	G	P	H
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	Y	E	N	L	D	L	F	V	F	Y	D	Q	P	L	P	E	D	V	Q	G	R	D	Y	D	Y	P	G	L	V	D	V	K	Q	I	E	K	S	I	L	L	P	D	A	D	Y	Y	I	C	G	P	I	P	F	M	R	M	Q	H	D	A	L	K	N	L	G	I	H	E	A	R	I	H	Y	E	V	F	G	P	D
Template Known Secondary structure				T	T								S	S			T	T			B	T	T	T	B	S			S	S			T	T	T	S							T	T							S	S													T	T	T			G	G	G							S	S
Template Predicted Secondary structure
Template SS confidence
		320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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