Job Description P24232 Confidence 100.00% Date Thu Jan 5 11:41:28 GMT 2012 Rank 18 Aligned Residues 236 % Identity 19% Template c1cneA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:nitrate reductase; PDBTitle: structural studies on corn nitrate reductase: refined2 structure of the cytochrome b reductase fragment at 2.53 angstroms, its adp complex and an active site mutant and4 modeling of the cytochrome b domain Resolution 3.00 Å

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		151	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.		.	.	.	.	.	220	.	.	.
Predicted Secondary structure																																																																		.										.	.	.	.	.	.
Query SS confidence																																																																		.										.	.	.	.	.	.
Query Sequence		G	T	R	D	F	R	I	V	A	K	T	P	R	S	A	L	I	T	S	F	E	L	E	P	V	D	G	G	A	V	A	E	Y	R	P	G	Q	Y	L	G	V	W	L	K	P	E	G	F	P	H	Q	E	I	R	Q	Y	S	L	T	R	K	P	D	G	.	K	G	Y	R	I	A	V	K	R	.	.	.	.	.	.
Query Conservation																																																																		.										.	.	.	.	.	.
Alig confidence																																																		.	.															.										.	.	.	.	.	.
Template Conservation																																																		.	.
Template Sequence		G	R	I	H	C	R	L	V	A	K	K	E	L	S	R	D	V	R	L	F	R	F	S	L	P	S	P	D	Q	V	L	G	L	P	I	G	K	H	I	F	V	C	A	T	I	E	G	K	.	.	L	C	M	R	A	Y	T	P	T	S	M	V	D	E	I	G	H	F	D	L	L	V	K	V	Y	F	K	N	E	H
Template Known Secondary structure															B	T	T									S	S	T	T	S						T	T			B			B			B	T	T	B	.	.						B				S		T	T			S											S	S	S
Template Predicted Secondary structure																																																		.	.
Template SS confidence
		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.			.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
				224	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.											.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.			.
Predicted Secondary structure		.	.																																.	.	.	.	.	.	.	.	.	.																																			.	.
Query SS confidence		.	.																																.	.	.	.	.	.	.	.	.	.																																			.	.
Query Sequence		.	.	E	E	G	G	Q	V	S	N	W	L	H	N	H	A	N	V	G	D	V	V	K	L	V	A	P	A	G	D	F	F	M	.	.	.	.	.	.	.	.	.	.	A	V	A	D	D	T	P	V	T	L	I	S	A	G	V	G	Q	T	P	M	L	A	M	L	D	T	L	A	K	A	G	H	T	A	.	.	Q
Query Conservation		.	.																																.	.	.	.	.	.	.	.	.	.																																			.	.
Alig confidence		.	.																																.	.	.	.	.	.	.	.	.	.																																			.	.
Template Conservation
Template Sequence		P	K	F	P	N	G	G	L	M	T	Q	Y	L	D	S	L	P	V	G	S	Y	I	D	V	K	G	P	L	G	H	V	E	Y	T	G	R	G	S	F	V	I	N	G	K	Q	R	N	A	R	R	L	A	M	I	C	G	G	S	G	I	T	P	M	Y	Q	I	I	Q	A	V	L	R	D	Q	P	E	D	H	T	E
Template Known Secondary structure		T	T	S	T	T											S		T	T				B							S					S	S	S					S	S	S					S								S	S		S													S	T	T	T
Template Predicted Secondary structure
Template SS confidence
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
		290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.			.	.	.	.	.	360	.	.	.	.	.	.	.
Predicted Secondary structure																																																																			.	.
Query SS confidence																																																																			.	.
Query Sequence		V	N	W	F	H	A	A	E	N	G	D	V	H	A	F	A	D	E	V	K	E	L	G	Q	S	L	P	R	F	T	A	H	T	W	Y	R	Q	P	S	E	A	D	R	A	K	G	Q	F	D	S	E	G	L	M	D	L	S	K	L	E	G	A	F	S	D	.	.	P	T	M	Q	F	Y	L	C	G	P	V	G	F
Query Conservation																																																																			.	.
Alig confidence																														.																																					.	.
Template Conservation																														.
Template Sequence		M	H	L	V	Y	A	N	R	T	E	D	D	I	L	L	R	D	E	L	D	R	W	A	A	E	Y	P	D	.	R	L	K	V	W	Y	V	I	D	Q	V	K	R	P	E	E	G	W	K	Y	S	V	G	F	V	T	E	A	V	L	R	E	H	V	P	E	G	G	D	D	T	L	A	L	A	S	G	P	P	P	M
Template Known Secondary structure									S	B	T	T			T	T	S					T					S	T	T	.	T								S	B		S		T	T	T				S	B		S	S								T	T	S				T	T	T							S		T
Template Predicted Secondary structure																														.
Template SS confidence
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.		.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.
		368	.		370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.
Predicted Secondary structure				.
Query SS confidence				.
Query Sequence		M	Q	.	F	T	A	K	Q	L	V	D	L	G	V	K	Q	E	N	I	H	Y	E	C
Query Conservation				.
Alig confidence				.
Template Conservation
Template Sequence		I	Q	F	A	I	S	P	N	L	E	K	M	K	Y	D	M	A	N	S	F	V	V	F
Template Known Secondary structure				T	T	T	S	S					T	T			S	T	T	T	B
Template Predicted Secondary structure
Template SS confidence
		248	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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