Job Description P77754 Confidence 32.37% Date Thu Jan 5 12:32:31 GMT 2012 Rank 17 Aligned Residues 99 % Identity 12% Template c3oopA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:lin2960 protein; PDBTitle: the structure of a protein with unknown function from listeria innocua2 clip11262 Resolution 1.78 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		46	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.								.	.	.	.	.	.	.	90	.	.	.	.					.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.
Predicted Secondary structure																																							.	.	.	.	.	.	.													.	.	.	.
Query SS confidence																																							.	.	.	.	.	.	.													.	.	.	.
Query Sequence		P	H	Q	D	M	M	F	K	D	L	N	L	T	D	A	Q	K	Q	Q	I	R	E	I	M	K	G	Q	R	D	Q	M	K	R	P	P	L	E	.	.	.	.	.	.	.	E	R	R	A	M	H	D	I	I	A	S	D	.	.	.	.	T	F	D	K	V	K	A	E	A	Q	I	A	K	M	E	E	Q	R	K	A
Query Conservation																																							.	.	.	.	.	.	.													.	.	.	.
Alig confidence																																							.	.	.	.	.	.	.													.	.	.	.
Template Conservation
Template Sequence		L	F	L	X	R	S	I	A	S	Y	D	V	T	P	E	Q	W	S	V	L	E	G	I	E	A	N	E	P	I	S	Q	K	E	I	A	L	W	T	K	K	D	T	P	T	V	N	R	I	V	D	V	L	L	R	K	E	L	I	V	R	E	I	R	R	I	S	L	L	S	L	T	D	K	G	R	K	E	T	T	E
Template Known Secondary structure								T	T	T	S	S	S															S	S											T																T	T	S								S
Template Predicted Secondary structure
Template SS confidence
		21	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100
		115	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	M	L	A	H	M	E	T	Q	N	K	I	Y	N	I	L	T	P	E	Q	K	K	Q	F	N	A	N	F	E	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	R	D	I	V	E	A	S	C	E	K	X	F	A	G	V	T	R	T	D	L	E	Q	F	T	A	I	L	K	N
Template Known Secondary structure														T	T	T
Template Predicted Secondary structure
Template SS confidence
		105	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions