Job Description P76349 Confidence 100.00% Date Thu Jan 5 12:22:12 GMT 2012 Rank 2 Aligned Residues 304 % Identity 13% Template d1pswa_ SCOP info UDP-Glycosyltransferase/glycogen phosphorylase UDP-Glycosyltransferase/glycogen phosphorylase ADP-heptose LPS heptosyltransferase II Resolution 2.00

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		28	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.		.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.
Predicted Secondary structure																												.
Query SS confidence																												.
Query Sequence		D	F	V	V	I	H	I	P	D	Q	I	G	D	A	M	A	I	F	P	V	I	R	A	L	E	L	.	H	K	I	K	H	L	L	I	V	T	S	T	I	N	L	E	V	F	N	A	L	K	L	E	Q	T	K	L	T	L	V	T	M	T	M	Q	D	H	A	T	L	K	E	I	K	D	L	A	K	N	I	T	Q
Query Conservation																												.
Alig confidence																												.																															.	.	.	.	.	.	.	.	.
Template Conservation																																																											.	.	.	.	.	.	.	.	.
Template Sequence		X	K	I	L	V	I	G	P	S	W	V	G	D	X	X	X	S	Q	S	L	Y	R	T	L	Q	A	R	Y	P	Q	A	I	I	D	V	X	A	P	A	W	C	R	P	L	L	S	R	X	P	E	V	N	E	A	I	P	X	.	.	.	.	.	.	.	.	.	E	I	G	E	R	R	K	L	G	H	S	L	R	E
Template Known Secondary structure										S	S																		S	T	T									G	G	G					T	T		T	T								.	.	.	.	.	.	.	.	.												T	T	T
Template Predicted Secondary structure																																																											.	.	.	.	.	.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.										.	.	60	.	.	.	.	.	.	.	.	.	70	.
		107	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																											.	.	.	.	.	.	.
Query SS confidence																																																																											.	.	.	.	.	.	.
Query Sequence		Q	Y	G	T	P	D	L	C	I	E	G	M	R	K	K	N	L	K	T	M	L	F	I	S	Q	L	K	A	K	T	N	F	Q	V	V	G	I	T	M	N	C	F	S	P	L	C	K	N	A	S	S	M	D	Q	K	L	R	A	P	V	P	M	T	W	A	F	M	M	R	E	A	G	F	.	.	.	.	.	.	.
Query Conservation																																																																											.	.	.	.	.	.	.
Alig confidence			.	.																					.	.																															.	.	.																.	.	.	.	.	.	.
Template Conservation			.	.																					.	.																															.	.	.
Template Sequence		K	.	.	R	Y	D	R	A	Y	V	L	P	N	S	F	K	S	A	L	V	P	L	F	.	.	A	G	I	P	H	R	T	G	W	R	G	E	X	R	Y	G	L	L	N	D	V	R	V	L	D	K	E	A	W	P	.	.	.	L	X	V	E	R	Y	I	A	L	A	Y	D	K	G	I	X	R	T	A	Q	D	L
Template Known Secondary structure		T	.	.	T		S						S			S	G	G	G						.	.	T	T		S							T	T	T		T	T	T		T							T	T	T			.	.	.	S								T	T	S		G	G	G		S	S	G	G	G	S
Template Predicted Secondary structure			.	.																					.	.																															.	.	.
Template SS confidence
		79			80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.			100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.				130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.			.	.	.	.	.	.	.	210	.	.	.	.	.	.		.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.
Predicted Secondary structure																									.	.															.
Query SS confidence																									.	.															.
Query Sequence		P	A	V	R	P	I	Y	E	L	P	L	S	E	D	V	L	D	E	V	R	E	E	M	.	.	R	S	L	G	S	Y	I	A	F	N	L	E	G	S	.	S	Q	E	R	T	F	S	L	S	I	A	E	N	L	I	A	K	I	Q	S	E	T	D	I	P	I	V	I	V	H	G	P	K	G	E	D	K	A	R	A
Query Conservation																									.	.															.
Alig confidence																									.	.															.																						.
Template Conservation																																																															.
Template Sequence		P	Q	P	L	L	W	P	Q	L	Q	V	S	E	G	E	K	S	Y	T	C	N	Q	F	S	L	S	S	E	R	P	X	I	G	F	C	P	G	A	E	F	G	P	A	K	R	W	P	H	Y	H	Y	A	E	L	A	K	Q	L	I	D	E	.	G	Y	Q	V	V	L	F	G	S	A	K	D	H	E	A	G	N	E
Template Known Secondary structure			S	S																				T	T			S	S	S										T	T		G	G	G	S																T	.	T									G	G	G
Template Predicted Secondary structure																																																															.
Template SS confidence
		152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.		.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230
		257	.	.	260	.	.						.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.		.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330
Predicted Secondary structure								.	.	.	.	.																																																				.
Query SS confidence								.	.	.	.	.																																																				.
Query Sequence		L	V	D	C	Y	N	.	.	.	.	.	N	V	Y	R	L	S	L	P	P	S	I	K	R	S	A	A	I	I	K	D	A	Y	I	A	I	T	P	D	T	S	I	L	H	M	A	S	A	Y	N	T	P	V	V	A	I	Y	A	D	Y	K	T	.	R	W	P	A	M	A	D	V	S	E	S	V	V	V	G	Q	K
Query Conservation								.	.	.	.	.																																																				.
Alig confidence								.	.	.	.	.																																																				.
Template Conservation
Template Sequence		I	L	A	A	L	N	T	E	Q	Q	A	W	C	R	N	L	A	G	E	T	Q	L	D	Q	A	V	I	L	I	A	A	C	K	A	I	V	T	N	D	S	G	L	X	H	V	A	A	A	L	N	R	P	L	V	A	L	Y	G	P	S	S	P	D	F	T	P	P	L	S	H	K	A	R	V	I	R	L	I	T	G
Template Known Secondary structure				T	T	S						T	T					T	T	T	S											T	S	S						S	S									T	T								S	S	S		T	T	S	S					T	T						S	S
Template Predicted Secondary structure
Template SS confidence
		231	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310
								331	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	I	D	N	I	S	L	D	E	F	A	K	A	L	K	S	V	L	A
Query Conservation		.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.
Template Conservation
Template Sequence		E	G	Y	H	Q	S	L	I	D	I	T	P	Q	R	V	L	E	E	L	N	A	L	L	L
Template Known Secondary structure										T	S
Template Predicted Secondary structure
Template SS confidence
		321	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions