Job Description P76349 Confidence 98.39% Date Thu Jan 5 12:22:12 GMT 2012 Rank 8 Aligned Residues 315 % Identity 12% Template c3dzcA_ PDB info PDB header:isomerase Chain: A: PDB Molecule:udp-n-acetylglucosamine 2-epimerase; PDBTitle: 2.35 angstrom resolution structure of wecb (vc0917), a udp-n-2 acetylglucosamine 2-epimerase from vibrio cholerae. Resolution 2.35 Å

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		27	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.					.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.
Predicted Secondary structure																																							.	.	.	.
Query SS confidence																																							.	.	.	.
Query Sequence		T	D	F	V	V	I	H	I	P	D	Q	I	G	D	A	M	A	I	F	P	V	I	R	A	L	E	L	H	K	I	K	H	L	L	I	V	T	.	.	.	.	S	T	I	N	L	E	V	F	N	A	L	K	L	E	Q	T	K	L	T	L	V	T	M	T	M	Q	D	H	A	T	L	K	E	I	K	D	L	A	K
Query Conservation																																							.	.	.	.
Alig confidence										.																													.	.	.	.
Template Conservation										.
Template Sequence		M	K	K	V	L	I	V	F	.	G	T	R	P	E	A	I	K	M	A	P	L	V	Q	Q	L	C	Q	D	N	R	F	V	A	K	V	C	V	T	G	Q	H	R	E	M	L	D	Q	V	L	E	L	F	S	I	T	P	D	F	D	L	N	I	M	E	P	G	Q	T	L	N	G	V	T	S	K	I	L	L	G	M
Template Known Secondary structure										.		S																		T	T										S	S	S										T	T				S								T	T
Template Predicted Secondary structure										.
Template SS confidence
		1	.	.	.	.	.	.	.		.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
		103	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.							.	.	.	.	170	.	.	.	.	.	.
Predicted Secondary structure																																																																	.	.	.	.	.	.
Query SS confidence																																																																	.	.	.	.	.	.
Query Sequence		N	I	T	Q	Q	Y	G	T	P	D	L	C	I	E	G	M	R	K	K	N	L	K	T	M	L	F	I	S	Q	L	K	A	K	T	N	F	Q	V	V	G	I	T	M	N	C	F	S	P	L	C	K	N	A	S	S	M	D	Q	K	L	R	A	P	.	.	.	.	.	.	V	P	M	T	W	A	F	M	M	R	E
Query Conservation																																																																	.	.	.	.	.	.
Alig confidence																																																																	.	.	.	.	.	.
Template Conservation
Template Sequence		Q	Q	V	L	S	S	E	Q	P	D	V	V	L	V	H	G	D	T	A	T	T	F	A	A	S	L	A	A	Y	Y	Q	Q	I	P	V	G	H	V	E	A	G	L	R	T	G	N	I	Y	S	P	W	P	E	E	G	N	R	K	L	T	A	A	L	T	Q	Y	H	F	A	P	T	D	T	S	R	A	N	L	L	Q
Template Known Secondary structure											S						T	T	S												T	T	T							T						S		T	T	S	S	T	T											T		S					S	S
Template Predicted Secondary structure
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
		177	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.																	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	G	F	P	A	V	R	P	I	Y	E	L	P	L	S	E	D	V	L	D	E	V	R	E	E	M	R	S	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	S	Y	I	A	F	N	L	E	G	S	S	Q	E	R	T	F	S	L	S	I	A	E	N	L	I	A	K	I	Q	S	E	T	D	I
Query Conservation																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	N	Y	N	A	E	N	I	F	V	T	G	N	T	V	I	D	A	L	L	A	V	R	E	K	I	H	T	D	M	D	L	Q	A	T	L	E	S	Q	F	P	M	L	D	A	S	K	K	L	I	L	V	T	G	H	R	R	E	S	F	G	G	G	F	E	R	I	C	Q	A	L	I	T	T	A	E	Q	H	P	E
Template Known Secondary structure		T	T			G	G	G																																T		T	T			T	T	S								S		B				T	T																	T	T
Template Predicted Secondary structure
Template SS confidence
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.			.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.
Predicted Secondary structure																								.	.
Query SS confidence																								.	.
Query Sequence		P	I	V	I	V	H	G	P	K	G	E	D	K	A	R	A	L	V	D	C	Y	N	.	.	N	V	Y	R	L	S	L	P	P	S	I	K	R	S	A	A	I	I	K	D	A	Y	I	A	I	T	P	D	T	S	I	L	H	M	A	S	A	Y	N	T	P	V	V	A	I	Y	A	D	Y	K	T	R	W	P	A	M
Query Conservation																								.	.
Alig confidence																								.	.																																													.	.
Template Conservation																																																																						.	.
Template Sequence		C	Q	I	L	Y	P	V	H	L	N	P	N	V	R	E	P	V	N	K	L	L	K	G	V	S	N	I	V	L	I	E	P	Q	Q	Y	L	P	F	V	Y	L	M	D	R	A	H	I	I	L	T	D	S	G	G	I	Q	E	E	A	P	S	L	G	K	P	V	L	V	.	.	M	R	E	T	T	E	R	P	E	A
Template Known Secondary structure										B												T	T	T		T	T																				S					S		S	G	G	G	T	T	G	G	G	G	T						.	.			S	S		S
Template Predicted Secondary structure																																																																						.	.
Template SS confidence
		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.			.	.	310	.	.	.	.	.	.	.
		319	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	D	V	S	E	S	V	V	V	G	Q	K	I	D	N	I	S	L	D	E	F	A	K	A	L	K	S	V	L	A	R
Query Conservation
Alig confidence											.	.	.	.			.
Template Conservation											.	.	.	.			.
Template Sequence		V	A	A	G	T	V	K	L	V	.	.	.	.	G	T	.	N	Q	Q	Q	I	C	D	A	L	S	L	L	L	T	D
Template Known Secondary structure					T	S					.	.	.	.	T	T	.
Template Predicted Secondary structure											.	.	.	.			.
Template SS confidence
		318	.	320	.	.	.	.	.	.					.	.		.	330	.	.	.	.	.	.	.	.	.	340	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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