Job Description P76349 Confidence 26.67% Date Thu Jan 5 12:22:12 GMT 2012 Rank 89 Aligned Residues 137 % Identity 11% Template c3aerB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:light-independent protochlorophyllide reductase subunit b; PDBTitle: structure of the light-independent protochlorophyllide reductase2 catalyzing a key reduction for greening in the dark Resolution 2.80 Å

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		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	P	M	T	W	A	F	M	M	R	E	A	G	F	P	A	V	R	P	I	Y	E	L	P	L	S	E	D	V	L	D	E	V	R	E	E	M	R	S	L	G	S	Y	I	A	F	N	L	E	G	S	S	Q	E	R	T	F	S	L	S	I	A	E	N	L	I	A	K	I	Q	S	E	T	D	I	P	I	V	I	V
Query Conservation
Alig confidence																					.	.																													.	.	.	.	.	.	.	.	.
Template Conservation																					.	.																													.	.	.	.	.	.	.	.	.
Template Sequence		T	R	D	F	L	A	E	V	S	K	I	T	G	L	P	V	V	T	D	.	.	E	S	T	L	R	Q	P	W	W	S	A	S	V	D	S	T	Y	L	T	G	K	R	V	F	I	F	G	D	.	.	.	.	.	.	.	.	.	G	T	H	V	I	A	A	A	R	I	A	A	K	E	V	G	F	E	V	V	G	M
Template Known Secondary structure																					.	.		T	T									S	G	G	G	G	G	G	T	T							S	S	.	.	.	.	.	.	.	.	.														T	T
Template Predicted Secondary structure																					.	.																													.	.	.	.	.	.	.	.	.
Template SS confidence
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260			.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.										.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310
		246	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.			.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.
Predicted Secondary structure																																							.	.
Query SS confidence																																							.	.
Query Sequence		H	G	P	K	G	E	D	K	A	R	A	L	V	D	C	Y	N	N	V	Y	R	L	S	L	P	P	S	I	K	R	S	A	A	I	I	K	D	.	.	A	Y	I	A	I	T	P	D	T	S	I	L	H	M	A	S	A	Y	N	T	P	V	V	A	I	Y	A	D	Y	K	T	R
Query Conservation																																							.	.
Alig confidence																																							.	.							.
Template Conservation																																															.
Template Sequence		G	C	Y	N	R	E	M	A	R	P	L	R	T	A	A	A	E	Y	G	L	E	A	L	I	T	D	D	Y	L	E	V	E	K	A	I	E	A	A	A	P	E	L	I	L	G	.	T	Q	M	E	R	N	I	A	K	K	L	G	L	P	C	A	V	I	S	A	P	V	H	V	Q
Template Known Secondary structure				S		G	G	G										T	T	T							S															S					.											T	T							S		S			S	T
Template Predicted Secondary structure																																															.
Template SS confidence
		311	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.		.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions