Job Description P76349 Confidence 20.59% Date Thu Jan 5 12:22:12 GMT 2012 Rank 107 Aligned Residues 170 % Identity 13% Template c2x7vA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:probable endonuclease 4; PDBTitle: crystal structure of thermotoga maritima endonuclease iv in2 the presence of zinc Resolution 2.30 Å

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		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190								.	.	.	.	.	.	.	.	.	200	.	.	.	.									.	.	.	.	.	210	.	.	.	.	.	.		.	.	.	220	.	.
Predicted Secondary structure																																		.	.	.	.	.	.	.															.	.	.	.	.	.	.	.													.
Query SS confidence																																		.	.	.	.	.	.	.															.	.	.	.	.	.	.	.													.
Query Sequence		D	Q	K	L	R	A	P	V	P	M	T	W	A	F	M	M	R	E	A	G	F	P	A	V	R	P	I	Y	E	L	P	L	.	.	.	.	.	.	.	S	E	D	V	L	D	E	V	R	E	E	M	R	S	.	.	.	.	.	.	.	.	L	G	S	Y	I	A	F	N	L	E	G	S	.	S	Q	E	R	T	F
Query Conservation																																		.	.	.	.	.	.	.															.	.	.	.	.	.	.	.													.
Alig confidence																																		.	.	.	.	.	.	.															.	.	.	.	.	.	.	.													.
Template Conservation
Template Sequence		A	K	L	P	S	D	E	A	A	T	K	F	K	R	E	M	K	K	H	G	I	D	W	E	N	A	F	C	H	S	G	Y	L	I	N	L	A	S	P	K	D	D	I	W	Q	K	S	V	E	L	L	K	K	E	V	E	I	C	R	K	L	G	I	R	Y	L	N	I	H	P	G	S	H	L	G	T	G	E	E	E
Template Known Secondary structure																					T			G	G	G							T	T			T	T		S	S																						T												T	T	S
Template Predicted Secondary structure
Template SS confidence
		41	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120
		223	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.					.	.	.	.	.	290	.	.	.	.	.
Predicted Secondary structure																																																																.	.	.	.												.	.	.
Query SS confidence																																																																.	.	.	.												.	.	.
Query Sequence		S	L	S	I	A	E	N	L	I	A	K	I	Q	S	E	T	D	I	P	I	V	I	V	H	G	P	K	G	E	D	K	A	R	A	L	V	D	C	Y	N	N	V	Y	R	L	S	L	P	P	S	I	K	R	S	A	A	I	I	K	D	A	Y	.	.	.	.	I	A	I	T	P	D	T	S	I	L	H	.	.	.
Query Conservation																																																																.	.	.	.												.	.	.
Alig confidence																										.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.												.	.	.
Template Conservation																										.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	I	D	R	I	V	R	G	L	N	E	V	L	N	N	T	E	G	V	V	I	L	L	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	V	S	Q	K	G	G	N	I	G	Y	K	L	E	Q	L	K	K	I	R	D	L	V	D	Q	R	D	R	V	A	I	T	Y	D	T	C	H	G	F	D	S	G
Template Known Secondary structure															T	T			S							.	.	.	.	.	.	.	.	.	.	.	.	.	.						T	T				S	S												S		G	G	G													T	T
Template Predicted Secondary structure																										.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		121	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.															.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.
																	296	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	M	A	S	A	Y	N	T	P	V	V	A	I	Y	A	D	Y	K	T	R	W	P	A	M	A	D	V	S	E	S	V	V	V	G	Q	K	I	D	N	I	S	L	D	E	F	A	K	A	L	K
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																			.	.
Template Conservation																																																			.	.
Template Sequence		Y	D	I	T	K	K	E	G	V	E	A	L	L	N	E	I	E	S	L	F	G	L	E	R	L	K	M	I	H	L	N	D	S	K	Y	P	L	G	A	A	K	D	R	H	E	R	I	G	S	.	.	G	F	I	G	E	E	G	F	A	V	F	F	S
Template Known Secondary structure				T	T	S															T		G	G	G										S	S		T	T									T	T	S	.	.	S	S	S										T
Template Predicted Secondary structure																																																			.	.
Template SS confidence
		187	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.			.	.	.	.	240	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions