Job Description P76349 Confidence 86.70% Date Thu Jan 5 12:22:12 GMT 2012 Rank 38 Aligned Residues 286 % Identity 12% Template c2p6pB_ PDB info PDB header:transferase Chain: B: PDB Molecule:glycosyl transferase; PDBTitle: x-ray crystal structure of c-c bond-forming dtdp-d-olivose-transferase2 urdgt2 Resolution 1.88 Å

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		29	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.
Predicted Secondary structure																																																																					.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																					.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		F	V	V	I	H	I	P	D	Q	I	G	D	A	M	A	I	F	P	V	I	R	A	L	E	L	H	K	I	K	H	L	L	I	V	T	S	T	I	N	L	E	V	F	N	A	L	K	L	E	Q	T	K	L	T	L	V	T	M	T	M	Q	D	H	A	T	L	K	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																																					.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																												.																																									.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																												.
Template Sequence		R	I	L	F	V	A	A	G	S	P	A	T	V	F	A	L	A	P	L	A	T	A	A	R	N	A	.	G	H	Q	V	V	M	A	A	N	Q	D	M	G	P	V	V	T	G	V	G	L	P	A	V	A	T	T	D	L	P	I	R	H	F	I	T	T	D	R	E	G	R	P	E	A	I	P	S	D	P	V	A	Q
Template Known Secondary structure									S	S																	T	.	T									G	G	G						T	T	T						S		S	S		G	G	G	G	S		B		T	T	S		B					S	S
Template Predicted Secondary structure																												.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.		.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
																96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	I	K	D	L	A	K	N	I	T	Q	Q	Y	G	T	P	D	L	C	I	E	G	M	R	K	K	N	L	K	T	M	L	F	I	S	Q	L	K	A	K	T	N	F	Q	V	V	G	I	T	M	N	C	F	S	P	L	C	K	N	A	S	S	M	D	Q	K
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																												.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	R	F	T	G	R	W	F	A	R	M	A	A	S	S	L	P	R	M	L	D	F	S	R	A	W	.	.	R	P	D	L	I	V	G	G	T	M	S	Y	V	A	P	L	L	A	L	H	L	G	V	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	A	R	Q	T	W	D	A	V	D	A	D	G
Template Known Secondary structure																												.	.			S						T	T		T										T			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						S	S	S				T	T
Template Predicted Secondary structure																												.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.			.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130																.	.	.	.	.	.	.	.	.	140	.	.	.
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.																							.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	R	A	P	V	P	M	T	W	A	F	M	M	R	E	A	G	F	P	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	R	P	I	Y	E	L	P	L	S	E	D	V	L	D	E	V	R	E	E	M	R	S	L	G	S	Y	I	A	F	N	L	E	G	S	S	Q	E
Query Conservation																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																			.	.	.	.
Template Conservation																																																																														.	.	.	.
Template Sequence		I	H	P	G	A	D	A	E	L	R	P	E	L	S	E	L	G	L	E	R	L	P	A	P	D	L	F	I	D	I	C	P	P	S	L	R	P	A	N	A	A	P	A	R	M	M	R	H	V	A	T	S	R	Q	C	P	L	E	P	W	M	Y	T	R	D	T	R	Q	R	V	L	V	T	S	G	D	.	.	.	.
Template Known Secondary structure		T								T							T	T		S	S					S						S		G	G	G	S		S	S																				G	G	G	G				S	S										.	.	.	.
Template Predicted Secondary structure																																																																														.	.	.	.
Template SS confidence
		144	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.
		220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.		.	.	.	.	.	.	.
Predicted Secondary structure																																																																										.
Query SS confidence																																																																										.
Query Sequence		R	T	F	S	L	S	I	A	E	N	L	I	A	K	I	Q	S	E	T	D	I	P	I	V	I	V	H	G	P	K	G	E	D	K	A	R	A	L	V	D	C	Y	N	N	V	Y	R	L	S	L	P	P	S	I	K	R	S	A	A	I	I	K	D	A	Y	I	A	I	T	P	D	T	.	S	I	L	H	M	A	S
Query Conservation																																																																										.
Alig confidence		.	.																																														.	.	.	.	.	.	.	.	.																	.
Template Conservation		.	.																																														.	.	.	.	.	.	.	.	.
Template Sequence		.	.	R	N	F	D	F	L	R	G	L	A	K	D	L	V	R	W	D	V	E	L	I	V	A	A	P	D	T	V	A	E	A	L	R	A	E	V	P	Q	A	R	V	G	W	T	P	.	.	.	.	.	.	.	.	.	L	D	V	V	A	P	T	C	D	L	L	V	H	H	A	G	G	V	S	T	L	T	G	L
Template Known Secondary structure		.	.																T	T																				T	T	S			S				.	.	.	.	.	.	.	.	.					G	G	G		S							S		S
Template Predicted Secondary structure		.	.																																														.	.	.	.	.	.	.	.	.
Template SS confidence
				228	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.										.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.
		299	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.			.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																					.	.
Query SS confidence																					.	.
Query Sequence		A	Y	N	T	P	V	V	A	I	Y	A	D	Y	K	T	R	W	P	A	.	.	M	A	D	V	S	E	S	V	V	V	G	Q	K	I	D	N	I	S	L	D	E	F	A	K	A	L	K	S	V	L	A	R
Query Conservation																					.	.
Alig confidence																					.	.												.	.
Template Conservation																																		.	.
Template Sequence		S	A	G	V	P	Q	L	L	I	P	K	G	S	V	L	E	A	P	A	R	R	V	A	D	Y	G	A	A	I	A	L	L	.	.	P	G	E	D	S	T	E	A	I	A	D	S	C	Q	E	L	Q	A	K
Template Known Secondary structure				T									S														T	S						.	.	T	T	T
Template Predicted Secondary structure																																		.	.
Template SS confidence
		297	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.			.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions