 |
Job Description | P76008 | Confidence | 20.69% | Date | Thu Jan 5 12:17:18 GMT 2012 |
Rank | 94 | Aligned Residues | 64 |
% Identity | 27% | Template | d1fmfa_ |
SCOP info | Flavodoxin-like
| Cobalamin (vitamin B12)-binding domain
| Cobalamin (vitamin B12)-binding domain
|
Resolution | UNK |
|
 |
  |   |
24 | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | |
|
|
. | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 |
Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|  |  |  |  |
|
|  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|  | . | . | . |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
Q | R | L | T | D | A | G | H | Q | V | N | N | V | E | V | I | A | R | R | C | E | R | F | A | G | T | E | T | E | R | L | E | D | L | N | S | L | A | R | L | T | T | P | N | T | I | V | L | A | V | R | G | G | Y | . |
. |
. |
G | A | S | R | L | L | A | D | I | D | W | Q | A | L | V | A | R | Q | Q | H | D | P | L |
Query Conservation |   |
  |   |
|   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |
|   |   |
|
|   |
|
|   |   |
|   |   |
|   |   |
|   |   |   |
|   |   |   |
|
|
|   | . | . | . |
|   |   |
|
|
|   |   |
|
|   |   |   |
|   |   |   |   |   |   |   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
Template Conservation |   |
  |   |
|   |   |   |
|   |
|
|
|   |
|
|   |   |   |   | . | . | . | . | . | . | . | . | . | . | . | . |   |
|   |   |   |   |   |   |   |   |   |   |
|
|   |
|   |
|
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |   |   | . | . | . | . | . |   |   |   |   |
Template Sequence |   |
H | S | F | T | N | A | G | F | N | V | V | N | I | G | V | L | S | S | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
Q | E | D | F | I | N | A | A | I | E | T | K | A | D | L | I | C | V | S | S | L | Y | G | Q | G | E | I | D | C | K | G | L | R | E | K | C | D | E | A | G | L | . |
. |
. |
. |
. |
K | G | I | K |
Template Known Secondary structure |   |
 |  |  |  | T | T | T |
|  |  |  |  |  |  |  |  |  |
| . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |
|  |  |  |  |  |  |  |  | S | S | S |
|  |  |  |  |  | T | T |  |  |  |  |  |  |  | T | T |
| . | . | . | . | . | T | T |
|  |
Template Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
| . | . | . | . | . |
|
|
|  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
25 | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | |
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | |
|
|
|
|
. | . | . | . |
  |
  |   |
101 | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |
Query SS confidence |   |
|
|
|
|
Query Sequence |   |
L | I | C | G |
Query Conservation |   |
  |   |
|
|
Alig confidence |   |
|
|
|
|
Template Conservation |   |
|
|
|
|
Template Sequence |   |
L | F | V | G |
Template Known Secondary structure |   |
 |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |
Template SS confidence |   |
|
|
|
|
  |   |
88 | . | 90 | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|