Job Description P76008 Confidence 66.82% Date Thu Jan 5 12:17:18 GMT 2012 Rank 20 Aligned Residues 62 % Identity 6% Template c3qi7A_ PDB info PDB header:transcription Chain: A: PDB Molecule:putative transcriptional regulator; PDBTitle: crystal structure of a putative transcriptional regulator2 (yp_001089212.1) from clostridium difficile 630 at 1.86 a resolution Resolution 1.86 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30														.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Predicted Secondary structure																													.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																													.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		F	H	L	I	A	P	S	G	Y	C	I	K	Q	H	A	A	L	R	G	I	Q	R	L	T	D	A	G	.	.	.	.	.	.	.	.	.	.	.	.	.	H	Q	V	N	N	V	E	V	I	A	R	R	C	E	R	F	A	G	T	E	T	E	R	L	E	D	L	N	S	L	A	R	L	T	T	P	N	T	I	V
Query Conservation																													.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence											.																		.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.
Template Conservation											.																																												.	.	.	.	.	.
Template Sequence		V	A	V	V	T	Q	P	L	S	.	E	N	K	V	Q	Y	N	X	V	E	E	X	A	K	E	Y	E	E	E	N	K	I	D	K	T	K	V	K	Q	T	I	K	H	V	V	L	P	E	N	F	T	S	N	.	.	.	.	.	.	I	D	S	A	I	N	K	I	V	K	L	A	D	D	K	E	V	Q	A	I	V
Template Known Secondary structure									T	T	.	T																			T	T																	T	T	G	G	G	G	.	.	.	.	.	.										G	G	G	G		T	T
Template Predicted Secondary structure											.																																												.	.	.	.	.	.
Template SS confidence
		39	40	.	.	.	.	.	.	.		.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90							.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.
		71	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	S
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		117	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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