Job Description P76008 Confidence 54.22% Date Thu Jan 5 12:17:18 GMT 2012 Rank 35 Aligned Residues 73 % Identity 10% Template c2vk2A_ PDB info PDB header:transport protein Chain: A: PDB Molecule:abc transporter periplasmic-binding protein ytfq; PDBTitle: crystal structure of a galactofuranose binding protein Resolution 1.20 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.		.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure																								.
Query SS confidence																								.
Query Sequence		L	F	H	L	I	A	P	S	G	Y	C	I	K	Q	H	A	A	L	R	G	I	Q	.	R	L	T	D	A	G	H	Q	V	N	N	V	E	V	I	A	R	R	C	E	R	F	A	G	T	E	T	E	R	L	E	D	L	N	S	L	A	R	L	T	T	P	N	T	I	V	L	A	V	R	G	G	Y	G	A	S	R
Query Conservation																								.
Alig confidence																								.																	.	.	.	.	.	.	.	.	.
Template Conservation																																									.	.	.	.	.	.	.	.	.
Template Sequence		T	V	G	F	S	Q	V	G	S	E	S	G	W	R	A	A	E	T	N	V	A	K	S	E	A	E	K	R	G	I	T	L	K	I	A	D	G	Q	Q	.	.	.	.	.	.	.	.	.	K	Q	E	N	Q	I	K	A	V	R	S	F	V	A	Q	G	V	D	A	I	F	I	A	P	V	V	A	T	G	W	E	P
Template Known Secondary structure												S																		T									T	T	.	.	.	.	.	.	.	.	.																T		S							S	S	S	S	S
Template Predicted Secondary structure																																									.	.	.	.	.	.	.	.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.										.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.
		82	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	L	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	L	K
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		75	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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