Job Description P76008 Confidence 20.83% Date Thu Jan 5 12:17:18 GMT 2012 Rank 91 Aligned Residues 75 % Identity 9% Template c2qvcC_ PDB info PDB header:transport protein Chain: C: PDB Molecule:sugar abc transporter, periplasmic sugar-binding PDBTitle: crystal structure of a periplasmic sugar abc transporter2 from thermotoga maritima Resolution 2.40 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	F	H	L	I	A	P	S	G	Y	C	I	K	Q	H	A	A	L	R	G	I	Q	R	L	T	D	A	G	H	Q	V	N	N	V	E	V	I	A	R	R	C	E	R	F	A	G	T	E	T	E	R	L	E	D	L	N	S	L	A	R	L	T	T	P	N	T	I	V	L	A	V	R	G	G	Y	G	A	S	R	L
Query Conservation
Alig confidence																																					.	.	.	.	.	.	.	.
Template Conservation																																					.	.	.	.	.	.	.	.
Template Sequence		T	I	G	V	I	G	K	S	V	H	P	Y	W	S	Q	V	E	Q	G	V	K	A	A	G	K	A	L	G	V	D	T	K	F	F	V	.	.	.	.	.	.	.	.	P	Q	K	E	D	I	N	A	Q	L	Q	X	L	E	S	F	I	A	E	G	V	N	G	I	A	I	A	P	S	D	P	T	A	V	I	P	T
Template Known Secondary structure								S		S	S																		T								.	.	.	.	.	.	.	.		S	S																T	T		S							S	S	T	T	T	T
Template Predicted Secondary structure																																					.	.	.	.	.	.	.	.
Template SS confidence
		33	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.									.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.
		83	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	K	K
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		105	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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