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Job DescriptionP76008
Confidence24.41%DateThu Jan 5 12:17:18 GMT 2012
Rank81Aligned Residues81
% Identity12%Templatec2hbzA_
PDB info PDB header:hydrolase/hydrolase inhibitorChain: A: PDB Molecule:caspase-1; PDBTitle: crystal structure of human caspase-1 (arg286->ala, glu390->ala) in2 complex with 3-[2-(2-benzyloxycarbonylamino-3-methyl-butyrylamino)-3 propionylamino]-4-oxo-pentanoic acid (z-vad-fmk)
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  QHAALRGIQRLTDAGHQVNNVEVIARRCERFAGTETERLEDL. . NSLARLTTPNTIVLAVRGGYGA. . . . . . . . . . . . . .
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Template Sequence  EVDITGMTMLLQNLGYSVDVKKNLTASD. . . . . . MTTELEAFAHRPEHKTSDSTFLVFMSHGIREGICGKKHSEQVPDIL
Template Known Secondary structure  TT
S

......T
GGGGG
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TT
TT

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   183......190.........200.........210 .........220.........230.........240.........250......
 
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Query Sequence  . . SRLLADIDWQALVARQQHDPLLIC
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Template Sequence  QLNAIFNMLNTKNCPSL. KDKPKVII
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TSTTT
GGG.TTS
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   257..260.........270... ......280.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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