Job Description P31658 Confidence 99.85% Date Thu Jan 5 11:48:23 GMT 2012 Rank 21 Aligned Residues 168 % Identity 18% Template c3mgkA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:intracellular protease/amidase related enzyme PDBTitle: crystal structure of probable protease/amidase from2 clostridium acetobutylicum atcc 824 Resolution 2.00 Å

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		50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.			90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.
Predicted Secondary structure																																										.	.
Query SS confidence																																										.	.
Query Sequence		K	I	L	V	I	A	A	D	E	R	Y	L	P	T	D	N	G	K	L	F	S	T	G	N	H	P	I	E	T	L	L	P	L	Y	H	L	H	A	A	G	.	.	F	E	F	E	V	A	T	I	S	G	L	M	T	K	F	E	Y	W	A	M	P	H	K	D	E	K	V	M	P	F	F	E	Q	H	K	S	L	F
Query Conservation																																										.	.
Alig confidence										.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation										.	.	.	.	.	.	.	.	.	.	.	.	.	.																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	I	D	V	L	L	F	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	F	E	T	L	D	V	F	G	P	V	E	I	F	G	N	L	Q	D	D	F	E	L	N	F	I	S	S	D	G	G	L	V	E	S	S	Q	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure									T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T														T	T		T	T	T								S	S							T	T		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure										.	.	.	.	.	.	.	.	.	.	.	.	.	.																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		4	.	.	.	.	.	10	.															.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.
		128	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	N	P	K	K	L	A	D	V	V	A	S	L	N	A	D	S	E	Y	A	A	I	F	V	P	G	G	H	G	A	L	I	G	L	P	E	S	Q	D	V	A	A	A	L	Q	W	A	I	K	N	D	R	F	V	I	S	L	C	H	G	P	A	A	F	L	A	L	R	H	G	D	N	P	L	N	G	Y	S	I	C
Query Conservation
Alig confidence		.	.	.	.																										.																																						.	.	.	.
Template Conservation		.	.	.	.																										.																																						.	.	.	.
Template Sequence		.	.	.	.	V	R	V	E	T	S	L	Y	T	R	D	E	N	I	E	K	I	L	F	V	P	G	G	S	G	.	T	R	E	K	V	N	D	D	N	F	I	N	F	I	G	N	M	V	K	E	S	K	Y	I	I	S	V	C	T	G	S	A	L	L	S	K	A	.	.	.	.	G	I	L	N	G	K	R	A	T
Template Known Secondary structure		.	.	.	.						B						S	S	S									S	T		.					T	T																S						T	T								T	.	.	.	.	T	T	T	T	T	S
Template Predicted Secondary structure		.	.	.	.																										.																																						.	.	.	.
Template SS confidence
						50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.		.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.					.	.	.	.	.	.	.	.	120
		208	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Predicted Secondary structure
Query SS confidence
Query Sequence		A	F	P	D	A	A	D	K	Q	T	P	E	I	G	Y	M	P	G	H	L	T	W	Y	F	G	E	E	L	K	K	M	G	M	N	I	I	N	D	D	I	T	G	R	V	H	K	D	R	K	L	L	T	G	D	S	P	F	A	A	N	A	L	G	K	L	A	A	Q	E	M	L	A	A
Query Conservation
Alig confidence				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.
Template Conservation				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.
Template Sequence		T	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	R	S	F	K	W	V	T	E	Q	N	E	D	V	L	W	V	K	.	E	A	R	W	V	K	D	G	N	I	Y	T	S	S	G	V	S	A	G	I	D	M	T	L	G	F	I	E	D	L	I	G	K
Template Known Secondary structure				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	T	T						T	T		T	T	S				S	.	S		S					T	T						S
Template Predicted Secondary structure				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.
Template SS confidence
		121	.																				.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140		.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions