Job Description P31658 Confidence 78.23% Date Thu Jan 5 11:48:23 GMT 2012 Rank 94 Aligned Residues 112 % Identity 12% Template c3edoA_ PDB info PDB header:flavoprotein Chain: A: PDB Molecule:putative trp repressor binding protein; PDBTitle: crystal structure of flavoprotein in complex with fmn2 (yp_193882.1) from lactobacillus acidophilus ncfm at 1.203 a resolution Resolution 1.20 Å

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		46	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	G	K	H	K	I	L	V	I	A	A	D	E	R	Y	L	P	T	D	N	G	K	L	F	S	T	G	N	H	P	I	E	T	L	L	P	L	Y	H	L	H	A	A	G	F	E	F	E	V	A	T	I	S	G	L	M	T	K	F	E	Y	W	A	M	P	H	K	D	E	K	V	M	P	F	F	E	Q	H	K	S
Query Conservation
Alig confidence															.	.	.	.	.	.				.	.	.													.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.
Template Conservation															.	.	.	.	.	.				.	.	.													.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	X	A	K	K	T	L	I	L	Y	Y	S	W	.	.	.	.	.	.	S	G	E	.	.	.	T	K	K	X	A	E	K	I	N	S	E	I	.	.	.	.	.	K	D	S	E	L	K	E	V	K	V	S	E	G	T	F	D	A	D	Y	K	T	.	.	.	.	.	.	.	.	.	.	.	S	D	I	A	L	D
Template Known Secondary structure														S	.	.	.	.	.	.	S	S		.	.	.												S	.	.	.	.	.	T	T							B			T	T	S	S							.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure															.	.	.	.	.	.				.	.	.													.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		0	.	.	.	.	.	.	.	.	.	10	.	.							.	.	.				.	.	.	.	20	.	.	.	.	.	.	.						.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.												.	50	.	.	.	.
		126	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	F	R	N	P	K	K	L	A	D	V	V	A	S	L	N	A	D	S	E	Y	A	A	I	F	V	P	G	G	H	G	A	L	I	G	L	P	E	S	Q	D	V	A	A	A	L	Q	W	A	I	K	N	D	R	F	V	I	S	L	C
Query Conservation
Alig confidence																														.	.	.
Template Conservation																														.	.	.
Template Sequence		Q	I	Q	G	N	K	D	F	P	E	I	Q	L	D	N	I	D	Y	N	N	Y	D	L	I	L	I	G	S	.	.	.	P	V	W	S	G	Y	P	A	T	P	I	K	T	L	L	D	Q	X	K	N	Y	R	G	E	V	A	S	F	F
Template Known Secondary structure				T	T	S	S						B						G	G	G		S							.	.	.				T	T				T									T	T	T			S
Template Predicted Secondary structure																														.	.	.
Template SS confidence
		56	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.				.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions