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Job DescriptionP31658
Confidence99.70%DateThu Jan 5 11:48:23 GMT 2012
Rank25Aligned Residues156
% Identity10%Templatec3bhnA_
PDB info PDB header:unknown functionChain: A: PDB Molecule:thij/pfpi domain protein; PDBTitle: crystal structure of a dj-1/pfpi-like protein (shew_2856) from2 shewanella loihica pv-4 at 1.76 a resolution
Resolution1.76 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  GNHPIETLLPLYHLHAA. . GFEFEVATISGLMTKFEYWAMPHKDEKVMPFFEQHKSLFRNPKKLADVVASLNADSEYAAI
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Template Sequence  DFTDVDFFLXNDLLGRTSDSWTVRILGTKPEHHSQLGXTV. . . . . . . . . . . . . . . . . . . . . . . . . KTDGHVSEVKEQDVV
Template Known Secondary structure  TB
TT
SSSSSSBTT

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SGGGGGG
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Query Sequence  FVPGGHGALIGLPESQDVAAALQWAIKNDRFVISLCHGPAAFLALRHGDNPLNGYSICAFPDAADKQTPEIGYMPGHLTW
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Template Sequence  LITSGYRGIPAALQDE. NFXSALKLDPSRQLIGSICAGSFVLHEL. . . . GLLKGKKLTTN. . . . . . . . . . . . . . . . . . . P
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   66...70.........80. ........90.........100......... 110.........120 .
 
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Query Sequence  YFGEELKKMGMNIINDDITGRVHKDRKLLTGDSPFAANALGKLAAQEMLAA
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Template Sequence  DAKAVLQGXGGDVQDLP. . . . LVIEGNIATAGGCLSLLYLVGWLAERLFDS
Template Known Secondary structure  GGTT

SSS....TT
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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