Job Description P31658 Confidence 87.36% Date Thu Jan 5 11:48:23 GMT 2012 Rank 80 Aligned Residues 152 % Identity 20% Template c2q9uB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:a-type flavoprotein; PDBTitle: crystal structure of the flavodiiron protein from giardia2 intestinalis Resolution 1.90 Å

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		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	Y	P	K	P	Y	R	G	K	H	K	I	L	V	I	A	A	D	E	R	Y	L	P	T	D	N	G	K	L	F	S	T	G	N	H	P	I	E	T	L	L	P	L	Y	H	L	H	A	A	G	F	E	F	E	V	A	T	I	S	G	L	M	T	K	F	E	Y	W	A	M	P	H	K	D	E	K	V	M	P	F
Query Conservation
Alig confidence																					.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																					.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	W	S	K	G	Q	H	C	Q	K	K	V	T	V	V	L	D	S	M	.	.	.	.	.	.	.	.	.	.	.	.	Y	G	T	T	H	R	M	A	L	A	L	L	D	G	A	R	S	T	G	C	E	T	V	L	L	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure					T	T					S									S	.	.	.	.	.	.	.	.	.	.	.	.	S	S																T	T								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																					.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		248	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.													.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.
		120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.					.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.
Predicted Secondary structure																																																											.	.	.	.
Query SS confidence																																																											.	.	.	.
Query Sequence		F	E	Q	H	K	S	L	F	R	N	P	K	K	L	A	D	V	V	A	S	L	N	A	D	S	E	Y	A	A	I	F	V	P	G	G	H	G	A	L	I	G	L	P	E	S	Q	D	V	A	A	A	L	Q	W	A	I	K	.	.	.	.	N	D	R	F	V	I	S	L	C	H	G	P	A	A	F	L	A	L	R
Query Conservation																																																											.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.																								.	.	.																					.	.	.	.										.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.																								.	.	.																																		.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	M	T	S	S	D	I	T	K	V	A	L	H	T	Y	D	S	G	A	V	A	F	A	S	.	.	.	P	T	L	N	N	T	M	M	P	S	V	A	A	A	L	N	Y	V	R	G	L	T	L	I	K	G	K	P	A	F	A	F	G	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	G	G	G														S							.	.	.				T	T																	T	T	T	T	T	S	B						.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.																								.	.	.																																		.	.	.	.	.	.	.	.	.	.
Template SS confidence
													293	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.				.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.
		196	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.						.	.	.	.	.	.	270
Predicted Secondary structure																																																																						.	.	.	.	.
Query SS confidence																																																																						.	.	.	.	.
Query Sequence		H	G	D	N	P	L	N	G	Y	S	I	C	A	F	P	D	A	A	D	K	Q	T	P	E	I	G	Y	M	P	G	H	L	T	W	Y	F	G	E	E	L	K	K	M	G	M	N	I	I	N	D	D	I	T	G	R	V	H	K	D	R	K	L	L	T	G	D	S	P	.	.	.	.	.	F	A	A	N	A	L	G
Query Conservation																																																																						.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.														.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	A	F	G	W	S	N	R	A	V	P	D	.	.	.	.	.	.	.	.	.	.	.	.	I	V	A	E	L	R	D	G	C	K	A	D	.	.	.	.	.	.	.	.	V	Y	D	E	K	G	I	T	F	K	F	N	Y	T	E	E	L	L	E	Q	A	Y	N	A	G
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.			S	S	S							.	.	.	.	.	.	.	.	.	.	.	.								T	S			B	.	.	.	.	.	.	.	.				S	S						S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.
Template SS confidence
														349	350	.	.	.	.	.	.	.	.	.													360	.	.	.	.	.	.	.	.	.	370	.									.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.
		271	.	.	.	.	.	.	.	.	280	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	L	A	A	Q	E	M	L	A	A	Y	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	D	L	G	K	R	A	I	A	Y	C	E
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		397	.	.	400	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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