Job Description P31658 Confidence 39.11% Date Thu Jan 5 11:48:23 GMT 2012 Rank 135 Aligned Residues 151 % Identity 19% Template c1vmeB_ PDB info PDB header:electron transport Chain: B: PDB Molecule:flavoprotein; PDBTitle: crystal structure of flavoprotein (tm0755) from thermotoga maritima at2 1.80 a resolution Resolution 1.80 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	Y	P	K	P	Y	R	G	K	H	K	I	L	V	I	A	A	D	E	R	Y	L	P	T	D	N	G	K	L	F	S	T	G	N	H	P	I	E	T	L	L	P	L	Y	H	L	H	A	A	G	F	E	F	E	V	A	T	I	S	G	L	M	T	K	F	E	Y	W	A	M	P	H	K	D	E	K	V	M	P	F
Query Conservation
Alig confidence																					.	.	.	.	.	.	.	.	.	.	.	.																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																					.	.	.	.	.	.	.	.	.	.	.	.																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	V	A	K	G	D	P	K	K	G	K	V	T	V	I	Y	D	S	X	.	.	.	.	.	.	.	.	.	.	.	.	Y	G	F	V	E	N	V	X	K	K	A	I	D	S	L	K	E	K	G	F	T	P	V	V	Y	K	F	S	D	E	E	R	P	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure						T				T	T									S	.	.	.	.	.	.	.	.	.	.	.	.	S	S																T	T										S	S					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																					.	.	.	.	.	.	.	.	.	.	.	.																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		245	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.													.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.
		120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	E	Q	H	K	S	L	F	R	N	P	K	K	L	A	D	V	V	A	S	L	N	A	D	S	E	Y	A	A	I	F	V	P	G	G	H	G	A	L	I	G	L	P	E	S	Q	D	V	A	A	A	L	Q	W	A	I	K	N	D	R	F	V	I	S	L	C	H	G	P	A	A	F	L	A	L	R	H	G	D	N
Query Conservation
Alig confidence											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	S	E	I	L	K	D	I	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	S	E	A	L	I	F	G	V	S	T	Y	E	A	E	I	H	P	L	X	R	F	T	L	L	E	I	I	D	K	A	N	Y	E	K	P	V	L	V	F	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure									S	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T		S										T	T																												.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		298	.	300	.	.	.	.	.	.																	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.
		200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.			.	.	.	.	.	.	270	.	.	.	.	.	.	.
Predicted Secondary structure																																																																		.	.
Query SS confidence																																																																		.	.
Query Sequence		P	L	N	G	Y	S	I	C	A	F	P	D	A	A	D	K	Q	T	P	E	I	G	Y	M	P	G	H	L	T	W	Y	F	G	E	E	L	K	K	M	G	M	N	I	I	N	D	D	I	T	G	R	V	H	K	D	R	K	L	L	T	G	D	S	P	.	.	F	A	A	N	A	L	G	K	L	A	A	Q	E	M
Query Conservation																																																																		.	.
Alig confidence		.	.	.	.	.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.											.	.
Template Conservation		.	.	.	.	.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	V	H	G	W	A	P	S	A	E	.	.	.	.	.	.	.	.	.	.	.	.	R	T	A	G	E	L	L	K	E	T	K	F	R	I	L	.	.	.	.	.	.	.	.	.	.	S	F	T	E	I	K	G	S	N	X	D	E	R	K	I	E	E	A	I	S	L	L	K	K	E	L
Template Known Secondary structure		.	.	.	.	.	.	.	.							T	T	S	.	.	.	.	.	.	.	.	.	.	.	.									T	S	S					.	.	.	.	.	.	.	.	.	.							S	S	S			T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.
Template SS confidence
										348	.	350	.	.	.	.	.	.													.	.	.	360	.	.	.	.	.	.	.	.	.	370	.											.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions