Job Description P0ABJ3 Confidence 100.00% Date Thu Jan 5 11:15:36 GMT 2012 Rank 2 Aligned Residues 192 % Identity 21% Template d1v54c_ SCOP info Cytochrome c oxidase subunit III-like Cytochrome c oxidase subunit III-like Cytochrome c oxidase subunit III-like Resolution 1.80

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		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.							.	.	.	.	60	.	.	.	.	.	.	.		.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure																																																	.	.	.	.	.	.													.
Query SS confidence																																																	.	.	.	.	.	.													.
Query Sequence		A	T	A	H	A	H	E	H	G	H	H	D	A	G	G	T	K	I	F	G	F	W	I	Y	L	M	S	D	C	I	L	F	S	I	L	F	A	T	Y	A	V	L	V	N	G	T	A	.	.	.	.	.	.	G	G	P	T	G	K	D	I	F	E	L	P	.	F	V	L	V	E	T	F	L	L	L	F	S	S	I
Query Conservation																																																	.	.	.	.	.	.													.
Alig confidence																																																	.	.	.	.	.	.													.
Template Conservation
Template Sequence		R	E	S	T	F	Q	G	H	H	T	P	A	V	Q	K	G	L	R	Y	G	M	I	L	F	I	I	S	E	V	L	F	F	T	G	F	F	W	A	F	Y	H	S	S	L	A	P	T	P	E	L	G	G	C	W	P	P	T	G	I	H	P	L	N	P	L	E	V	P	L	L	N	T	S	V	L	L	A	S	G	V
Template Known Secondary structure					T	T	T																																							S			G	G	G	T	S	S	S	S		T	T						T	T	S
Template Predicted Secondary structure
Template SS confidence
		63	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	Y	G	M	A	A	I	A	M	Y	K	N	N	K	S	Q	V	I	S	W	L	A	L	T	W	L	F	G	A	G	F	I	G	M	E	I	Y	E	F	H	H	L	I	V	N	G	M	G	P	D	R	S	G	F	L	S	A	F	F	A	L	V	G	T	H	G	L	H	V	T	S	G	L	I	W	M	A	V	L	M
Query Conservation
Alig confidence																																									.	.	.
Template Conservation																																									.	.	.
Template Sequence		S	I	T	W	A	H	H	S	L	M	E	G	D	R	K	H	M	L	Q	A	L	F	I	T	I	T	L	G	V	Y	F	T	L	L	Q	A	S	E	Y	.	.	.	Y	E	A	P	F	T	I	S	D	G	V	Y	G	S	T	F	F	V	A	T	G	F	H	G	L	H	V	I	I	G	S	T	F	L	I	V	C	F
Template Known Secondary structure												T	T																												.	.	.				S	S		T	T	S
Template Predicted Secondary structure																																									.	.	.
Template SS confidence
		143	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.				.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	Q	I	A	R	R	G	L	T	S	T	N	R	T	R	I	M	C	L	S	L	F	W	H	F	L	D	V	V	W	I	C	V	F	T	V	V	Y	L	M	G	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	R	Q	L	K	F	H	F	T	S	N	H	H	F	G	F	E	A	A	A	W	Y	W	H	F	V	D	V	V	W	L	F	L	Y	V	S	I	Y	W	W	G	S
Template Known Secondary structure						T	T				S	S																										T	T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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